Planococcus rifietoensis: AUC31_00105
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Entry
AUC31_00105 CDS
T04201
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
prt
Planococcus rifietoensis
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prt03032
]
AUC31_00105
03400 DNA repair and recombination proteins [BR:
prt03400
]
AUC31_00105
Enzymes [BR:
prt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AUC31_00105
DNA replication proteins [BR:
prt03032
]
Prokaryotic type
DNA Topoisomerases
AUC31_00105
DNA repair and recombination proteins [BR:
prt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUC31_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALS73742
UniProt:
A0A0U2YQ36
LinkDB
All DBs
Position
complement(1716202..1718271)
Genome browser
AA seq
689 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASLGHLRDLPRSQMGVDVENNYEPRYITIRGK
GPILQDLKKEAKKAKKVFLAADPDREGEAIAWHLANALGVDVDSDCRVVFNEITKDAVKD
AFKQPRKLDMDLVDAQQARRILDRLVGYSISPILWKKVKKGLSAGRVQSVALGLIIDREN
EIKNFEPEEYWSITGEFEKAKKIFEAQFYGTPEKKLKLSNEEDVKAVLATMKGKDFLVKS
VVKKERKRNPSPSFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGISVGKEGVTGLITYMR
TDSTRISESAKQDTIGFILDKYGEEYVTQKPAAKQSQKSQDAHEAVRPTSVHRTPESLKS
ILSRDLYRLYKLIWDRFVASQMSPAVLDTVMAELQNGEAIFRANGSQVKFPGFMKLYIEG
TDDKKEEKDNILPEMKEGDKVKATEITPNQHFTQPPPRYTEARLVRTLEELGIGRPSTYA
PTLDTIQKRGYVALDAKRFIPTELGEIVHQLVRDFFPDILNIEFTAKMENDLDSIEESEV
DWRAIIDVFYKEFAKDLEVAENEMEKVQIKDEPAGEDCEECGSPMVFKLGRYGKFMACSN
FPECRNTKAIVKHIGVKCPTCKEGEIVERKSKKRRVFYGCERYPECEFVSWDKPIERPCP
KCSSLMVEKKVKKGVQINCTACDYKEEVQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggattatttggtgattgtcgaatcgcccgcaaaggcgaagacaattgaaaggtat
ttgggaaagaagtataaagtgaaagcctctctcggccatttgcgcgatttgccgcgcagc
cagatgggggtagatgttgaaaacaattacgagccccgctatatcacgattcgcggaaaa
ggcccgattttgcaggatctaaaaaaagaagcgaaaaaagcgaaaaaagtctttctcgcg
gctgaccccgacagagaaggcgaagcgatcgcctggcatttggcgaacgcgctcggggtg
gacgtcgattcggattgccgtgtcgtgttcaacgaaattacaaaagacgcagtaaaagat
gcattcaagcaaccgcgcaaattggatatggatttggtcgatgcccagcaggcacggcgc
atcctagaccgtcttgtcggttatagcatcagcccgatcctatggaaaaaagtgaaaaaa
ggcttgtcggccggccgtgttcaatcggttgcacttggcctgattatcgaccgcgagaac
gaaatcaagaatttcgaaccagaagaatattggtcgattacaggcgagttcgaaaaagcg
aaaaaaatattcgaggcccagttttacggaacgcccgaaaagaaactgaagctctccaat
gaagaagatgtcaaagccgtgttggctacgatgaaaggcaaggatttccttgtgaagagc
gttgtcaaaaaagagcgcaaacggaatccttccccatctttcaccacatcctctctccag
caggaagcagcgcgcaagctgaatttccgtgccaagaaaacgatgatgctcgcacagcag
ctctatgaagggatctcggttggaaaagaaggcgtaaccgggttgatcacctacatgcgt
accgattccacacggatttccgaatcggccaagcaagatacgatcggtttcatccttgat
aaatacggcgaagaatatgtgacgcagaagcctgcagccaaacaatcccagaagtcacag
gatgcccacgaagctgtccgcccgactagcgtccaccgcacgccggaatcgctgaagagc
attttgtcccgcgatctttaccgcttgtacaaattgatctgggaccgttttgtagcgagc
cagatgtcacccgctgtcctggatacggtgatggccgagctgcaaaatggcgaagcgatt
ttccgcgccaacggttctcaagtgaagtttcctggtttcatgaagctttatattgaaggg
accgacgataagaaagaagaaaaagacaatattctccctgaaatgaaggaaggcgacaaa
gtcaaagcgactgaaattacgccgaaccagcatttcacccagccgcctccgcgttatacg
gaagcgcgcctggtgcgtactttggaagagctcgggataggccgaccgtcaacctatgcg
ccgactttggatacgatccaaaagcgcggctatgttgcactcgacgcaaagcgtttcatc
ccgaccgaacttggggaaattgtccatcaattggtgcgtgatttcttcccggatattttg
aacatcgagtttaccgcgaaaatggaaaacgatctggacagcatcgaagaaagtgaagta
gactggcgtgcgatcatcgatgtcttctacaaagaattcgccaaagatctcgaagtggca
gagaatgaaatggagaaagtccagatcaaagacgagcccgctggagaagattgcgaggaa
tgcggttcgccaatggtgttcaagcttgggcgctacggcaagttcatggcctgcagcaac
ttcccggaatgccgcaacacaaaagcgatcgtcaagcatatcggcgtcaaatgcccgact
tgtaaagaaggcgagatcgtcgaacggaagagcaagaagcgccgcgtgttctatggctgc
gaacgctatccggaatgtgaattcgtgtcttgggacaagccgatcgaacgcccttgcccg
aaatgcagcagcttgatggtcgaaaagaaagtgaaaaaaggcgtgcagatcaattgcaca
gcctgcgactacaaagaagaagttcaataa
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