Propioniciclava coleopterorum: G7070_16845
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Entry
G7070_16845 CDS
T06483
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
prv
Propioniciclava coleopterorum
Pathway
prv03030
DNA replication
prv03410
Base excision repair
prv03420
Nucleotide excision repair
prv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7070_16845 (ligA)
03410 Base excision repair
G7070_16845 (ligA)
03420 Nucleotide excision repair
G7070_16845 (ligA)
03430 Mismatch repair
G7070_16845 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prv03032
]
G7070_16845 (ligA)
03400 DNA repair and recombination proteins [BR:
prv03400
]
G7070_16845 (ligA)
Enzymes [BR:
prv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G7070_16845 (ligA)
DNA replication proteins [BR:
prv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G7070_16845 (ligA)
DNA repair and recombination proteins [BR:
prv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G7070_16845 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7070_16845 (ligA)
MMR (mismatch excision repair)
DNA ligase
G7070_16845 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G7070_16845 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
HHH_5
BRCT_2
HHH_3
Auto_anti-p27
Prot_ATP_ID_OB_C
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
QIK73624
UniProt:
A0A6G7Y9Q2
LinkDB
All DBs
Position
complement(3541695..3543761)
Genome browser
AA seq
688 aa
AA seq
DB search
MTDARARHAELAQLINDARFQYYVLDAPALTDAAFDAMMKELEALEEQIPELRTPDSPSQ
HVGGAVSATFAAVEHLVPMMSLDNAFSTAEVEKWYARLGGPAELLCEVKIDGLALDLVYR
DGRLASAATRGDGRFGEDVTANVLTIADIPHTLPAGAPDLLEVRGEVFMPPSAFAALNES
LLAAGKAPFANPRNSAAGSLRQKDPRVTASRRLRFFAHGIGASSGEPVTRQSDAYAQLAG
WGLPISPYNAVVDGLPAALDYIATQEGRRHDLAHEMDGVVLKVDDLARQRDLGFTSRAPR
WAIAFKYPPEEVNTKLLAIEVNTGRTGRVTPFGVMEPVVVAGSTVAMATLHNAHEVARKD
VRPGDTVVLRKAGDVIPEILGPVLALRPEGLPAWVMPTHCPSCGTELVEVREGDKDLRCP
NTRSCSSQLRERLFHLASRAALDIETLGFQAADALLASGIIADEGDLFALTEDDLARSDF
FTRTDPKSKQRVLTANATKLLANLEAAKTRPWPKFLVALSIRHIGKGVAPIVARAFPSVE
ALGTASLEELAQVEGVGPTLAASVVEWFGVDWHRAIVDKWLAAGAVLADEPAEAGEALPA
TLAGLTVVVTGSVPGHTRESAQQAITDRGGKASGSVSGKTSVLVAGESGGSKFAKAESLG
IPILAADQFEALLAEGAAAIERAAGAGQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatgcccgcgcccgccacgccgagttggcccagctgatcaacgacgcccgcttc
cagtactacgtgttggacgcgccggcgctcaccgacgccgccttcgacgcgatgatgaag
gaactcgaagccctcgaggagcagatccccgagctgcgcacccccgactcgcccagccag
cacgtcggcggcgcggtgtcggcgaccttcgccgccgtggagcacctggtgcccatgatg
agcctcgacaacgccttctccaccgcggaggtcgagaagtggtacgcccggctcggcggg
ccggccgagctcctgtgcgaggtcaagatcgacgggctggccctcgacctggtctaccgc
gacggccggctcgccagcgcagccacccggggcgacggccgcttcggcgaggacgtgacc
gccaacgtgctcaccatcgccgacatcccgcacacgctgccggcgggcgcgcccgacctg
ctcgaggtgcgcggagaggtgttcatgccgcccagcgcgttcgcggcactgaacgagtcg
ctgctggccgcgggcaaggcgccgttcgccaacccgcgcaactccgcagccgggtcgctg
cggcagaaggacccgcgcgtcacggcgtcccgccggctgcggttcttcgcccacggcatc
ggcgcgagcagcggcgagccggtcacccgccagtcggacgcttacgcgcagctcgccggg
tggggcctgccgatcagcccctacaacgcggtggtggacggcctgcccgccgcgctggac
tacatcgccacccaggagggccgccgccacgacctggcgcacgagatggacggcgtcgtg
ctgaaggtcgacgacctggcccggcagcgcgacctcggcttcacctcgcgcgctccccgg
tgggcgatcgccttcaagtacccgcccgaggaggtcaacaccaagctgctggccatcgag
gtgaacaccggccgcaccggccgcgtcacgccgttcggcgtgatggagccggtcgtggtg
gccggctcgacggtggcgatggcgacgctgcacaacgcgcacgaggtggcccgcaaggac
gtgcgccccggcgacaccgtcgtgctgcgcaaggccggcgacgtgatccccgagatcctc
gggccggtgctcgcgctgcgtcccgagggcctgcccgcctgggtgatgccgacgcactgc
cccagctgcggcaccgagctcgtcgaggtgcgcgagggcgacaaggacctgcgctgcccc
aacacccgcagctgctccagccagctccgcgagcgcctgttccacctcgcctcccgcgcc
gcgctcgacatcgagacgctcggcttccaggcggccgacgcgctgttggcgtccggcatc
atcgccgacgagggcgacctcttcgcgctgaccgaggacgacctggcccgcagcgacttc
ttcacccgcaccgacccgaagtccaagcagcgcgtcctgaccgcgaacgccaccaagctg
ctggccaacctcgaggccgccaagacgcggccgtggccgaagttcctggtggcgctgtcg
atccgccacatcggcaagggggtggcgcccatcgtcgcgcgcgccttccccagcgtcgag
gcgctgggcacggcctcgctggaggaactggcgcaggtcgagggcgtcggcccgacgctg
gccgcgtccgtcgtggagtggttcggggtggactggcaccgggccatcgtggacaagtgg
ctcgcggcgggcgcggtgctggccgacgagccggccgaggcgggcgaggcgctgccggcc
accttggccggcctgaccgtcgtggtgaccggctcggtgcccggccacacccgcgagtcg
gcgcagcaggcgatcaccgaccgcggcgggaaggcgtccggctcggtctcgggcaagacg
tcggtgctggtggcgggggagtcgggcggctccaagttcgccaaggcggagagcctgggc
atcccgatcctggccgcggaccagttcgaggcgctgctggccgagggcgcggcggccatc
gagcgggccgccggcgcgggtcagtag
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