Pseudomonas syringae pv. syringae B728a: Psyr_0564
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Entry
Psyr_0564 CDS
T00246
Name
(GenBank) Exonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psb03019
]
Psyr_0564
03009 Ribosome biogenesis [BR:
psb03009
]
Psyr_0564
Messenger RNA biogenesis [BR:
psb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psyr_0564
Ribosome biogenesis [BR:
psb03009
]
Eukaryotic type
Pre-60S particles
RNases
Psyr_0564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DHOR
Motif
Other DBs
NCBI-ProteinID:
AAY35634
UniProt:
Q4ZYY8
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All DBs
Position
641096..641632
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AA seq
178 aa
AA seq
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MQNKQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEW
NTRQHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMP
TLENWFHYRNLDVSTLKELAARWSPELKFKKGSTHLALDDIRESIAELRFYREHFIKP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaagcagaacctgatctggatcgatctggaaatgaccggtctggaccctgat
accgatgtcattatcgaaatggccacgatcatcaccgatagcgagctgaacaccctggcc
gaaggtccggtgatcgctgtgcatcagagcgacgaaacgctggcgaaaatggatgagtgg
aacactcgccagcacggcggttcgggcctgacccagcgcgtgcgcgaaagtaccgtcagc
atggctgaagccgaggcgcagacccttgagttcatcaaactgtgggtgccagagcgcagt
tcgccgatctgcggcaacagcatctgccaggatcgccgcttcctgtatcgccacatgccg
acgctggaaaactggttccactaccgcaatctggatgtctcgaccctcaaggaactggct
gcgcgctggtcccccgagctgaaattcaagaaaggcagcacccacctggcgctcgacgac
atccgtgagtcgattgccgagctgcgcttctaccgtgagcacttcatcaagccttga
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