Pseudomonas syringae pv. syringae B728a: Psyr_1588
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Entry
Psyr_1588 CDS
T00246
Name
(GenBank) Putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_1588
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psyr_1588
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
AAY36636
UniProt:
Q4ZW36
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All DBs
Position
complement(1787124..1788044)
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AA seq
306 aa
AA seq
DB search
MWFKNLLVYRLTQDVPFDAEALETALATKPARACASQEVATYGFVAPFGKGEDAPLVHIS
QDFMLIAARKEERILPGSVVRDALKEKVDEIEAEQMRKVYKKERDQLKDEIIQAFLPRAF
IRRSATFAAIAPKQGLILVNASSPKRAEDLLSTLREVIGSLPVRPLTVKVSPSATMTDWV
KTQKAADNFFVLDECELRDTHEDGGIVRCKRQDLTGDEIQLHLSTGKVVTQLSLAWQDKL
SFVLDDKLVVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGEFLPELFEALGGE
EIPQGI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcaaaaacctgcttgtctatcgcctgacccaggacgtgccttttgatgccgaa
gcgctggagacagcactggcgaccaaaccggcgcgcgcctgcgccagccaggaggtagcc
acctatggtttcgtcgctcctttcggcaagggcgaagacgctccattggtacacatcagt
caggacttcatgctgatcgcagcacgcaaggaagaacgcattctgccgggcagcgtcgtg
cgtgacgcgctcaaggaaaaggtcgacgagatcgaagccgagcagatgcgcaaggtctac
aagaaggaacgcgatcagctcaaggatgaaatcatccaggcgttcctgccgcgtgcgttt
atccgtcgctccgccactttcgccgccatcgcgccgaaacagggcctgatcctggtcaat
gcctccagcccgaaacgcgccgaggacctgttgtcgaccctgcgcgaagtcatcggctcg
ctgccggtacgtccgctgacggtcaaggtttcaccgagtgcgaccatgaccgactgggtc
aagacccagaaagcggccgacaacttcttcgtgctggacgagtgcgagctgcgcgacacc
catgaagatggcggcatcgtgcgctgcaagcgtcaggacctgaccggcgacgaaatccag
ctgcacctgagcacaggcaaggtcgtgacccaactgtcgctggcctggcaggacaagctg
tcgttcgtgctggacgataaactggtggtcaagcgtctgaagttcgaggacctgctgcag
gatcaggccgaacaggacggtggcgacgaagcgttgggacaactggacgccagcttcacg
ctgatgatgctgaccttcggcgagttcctgccggagctgttcgaggcattgggcggcgaa
gagattccgcagggcatctga
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