KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_4166Help
Entry
Psyr_4166         CDS       T00246                                 

Gene name
gatB
Definition
(RefSeq) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
psb  Pseudomonas syringae pv. syringae B728a
Pathway
psb00970  Aminoacyl-tRNA biosynthesis
psb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:psb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Psyr_4166 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:psb03029]
    Psyr_4166 (gatB)
Enzymes [BR:psb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Psyr_4166 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Psyr_4166 (gatB)
Mitochondrial biogenesis [BR:psb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Psyr_4166 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-GeneID: 3369703
NCBI-ProteinID: YP_237234
UniProt: Q4ZNS6
LinkDB All DBs
Position
4955603..4957048
Genome map
AA seq 481 aa AA seqDB search
MQWEVVIGLEIHTQLSTQSKIFSGSATTFGSEPNTQASLVDLGMPGVLPVLNKEAVRMAV
KFGLAVNAEIGQHNVFARKNYFYPDLPKGYQISQMELPIVGKGHLDIPLEDGTVKRIGIT
RAHLEEDAGKSLHEDFQGMTGIDLNRAGTPLLEIVSEPDMRNAKEAVAYVKAIHAIVRYL
GICDGNMAEGSLRCDCNVSIRPKGQVEFGTRCEIKNVNSFRFIEKAINSEIQRQIDLIED
GGKVIQQTRLYDPNTNETRAMRSKEEANDYRYFPDPDLLPVIIEDSFLEETRATLPELPP
QKRERFQSQFGLSTYDASVLASSREQADYFEQVVSISGDAKLAANWVMVELGSLLNKQGL
EIDQSPVSAEQLGGMLKRITDNTISGKIAKMVFEAMANGEGSADEVIEKRGLKQVTDSGA
IESMLDEVLAANAEQVEQYRAADEAKRGKMFGFFVGQAMKASKGKANPQQVNELLKAKLE
G
NT seq 1446 nt NT seq  +upstreamnt  +downstreamnt
atgcaatgggaagtcgtcatcgggctggagattcatacccagctttcgacccaatcaaag
attttttccggtagcgcgaccacgttcggctccgagcccaacacgcaggccagcctcgtc
gacctgggcatgcccggcgtattgccggtgctgaacaaggaagccgtgcgcatggccgtc
aagttcggcctggccgtcaacgccgaaatcggccagcacaacgtgtttgcccgcaagaac
tacttctacccggacctgcccaagggctatcagatcagccagatggagctgccgattgtc
ggcaagggccacctggacatcccccttgaagacggcaccgtcaagcgcatcggcatcacc
cgtgcgcacctggaagaggacgcgggcaagagcctgcacgaagacttccagggcatgacc
ggtatcgacctgaaccgtgccggcaccccgttgctggagatcgtttccgagccggacatg
cgcaacgccaaggaagccgtggcttacgtcaaggccatccatgcgattgtccgctacctg
ggcatctgtgacggcaacatggccgaaggttcgctgcgctgcgactgcaacgtatcgatt
cgccccaagggtcaggtcgagttcggcacgcgttgcgagatcaagaacgtcaactcgttc
cgcttcatcgaaaaagcgatcaacagcgagattcagcgccagatcgacctgatcgaagac
ggtggcaaggttatccagcagacacgcctgtatgacccgaacaccaacgaaacccgcgcc
atgcgcagcaaggaggaagccaacgactaccgttacttccccgacccggatctgttgccg
gtgatcatcgaggactcgttcctcgaagaaacccgcgccaccttgccggagctgccaccg
cagaaacgcgaacgcttccagagccagttcggtctgtcgacctacgacgccagcgtactg
gcttctagccgcgagcaggctgattacttcgaacaggtggtgagcatcagtggtgacgcc
aaactggcagccaactgggtcatggtcgagctgggcagcctgctcaacaagcagggcctg
gaaatcgaccagtcgccggtcagtgccgagcagttgggcggcatgctcaagcgcatcacc
gacaacaccatttccggcaagatcgcgaaaatggtcttcgaggcgatggccaatggtgaa
ggcagcgccgatgaagtcatcgaaaagcgcggcctgaagcaggtcaccgacagcggcgcc
atcgaatcgatgctcgacgaggtactggcagccaacgcggaacaggtcgaacagtatcgc
gccgccgatgaagccaagcgcggcaagatgttcggcttcttcgtcggtcaggcgatgaaa
gcctccaaaggcaaggccaacccgcagcaggtcaacgaactgctgaaggccaagctggag
ggctga

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