Pseudomonas syringae pv. syringae B728a: Psyr_4731
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Entry
Psyr_4731 CDS
T00246
Name
(GenBank) Sigma-70 region 2:Sigma-70 region 4
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psyr_4731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psb03021
]
Psyr_4731
Transcription machinery [BR:
psb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psyr_4731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_24
Sigma70_ECF
GerE
HTH_Tnp_ISL3
Sigma70_r3
HTH_40
TnsD
HTH_11
HTH_28
HTH_10
HTH_3
HTH_31
HTH_29
FaeA
HTH_7
HTH_IclR
HTH_5
HTH_AsnC-type
Phage_terminase
Terminase_5
EAP30
MerR
HTH_17
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AAY39758
UniProt:
Q4ZM64
LinkDB
All DBs
Position
complement(5608757..5609275)
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AA seq
172 aa
AA seq
DB search
MSSVPSTHSEIVGALYRDHRGWLLAWLRRNVACPQRAQDLSQDTFVRLLGRHELLAPREP
RAFLATVAKGLMFDHFRRAALEQAYLGELMQVPEAEQPSPEEQLLIVEDLKAIDRMLGTL
SSKARAAFLYSRLDGMSHAEIAEQLGVSVSRVRQYLAQAMRQCYVALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagtcccaagcactcatagcgagatcgttggtgcgctgtatcgcgatcatcgc
ggctggctgctggcctggctcagacgcaatgtcgcctgcccgcaacgtgctcaggatttg
agtcaggacacgttcgtgcgcttgctggggcgccatgaattgcttgcgcccagagaaccg
cgtgctttcctggcaaccgtcgccaaagggttgatgttcgatcacttccgacgcgctgcg
ctggagcaggcttacctcggggaattgatgcaggtgcccgaggccgagcagccctctccg
gaagagcagctgctgattgtggaagacctcaaggccatcgaccgcatgctcggcacgctg
tccagcaaagcgcgtgcagcttttctatacagtcgcctcgacggcatgagtcacgccgag
attgccgagcagctgggcgtttcggtctcgcgcgtcaggcagtacctggctcaggccatg
cgtcagtgctacgtggcgctctacggtgagccgacgtga
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