Pseudoxanthomonas spadix: DSC_05055
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Entry
DSC_05055 CDS
T01643
Name
(GenBank) competence lipoprotein
KO
K05807
outer membrane protein assembly factor BamD
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psd02000
]
DSC_05055
Transporters [BR:
psd02000
]
Other transporters
Pores ion channels [TC:
1
]
DSC_05055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_18
TPR_16
TPR_6
TPR_19
TPR_21
TPR_2
Motif
Other DBs
NCBI-ProteinID:
AER55664
UniProt:
G7UPX4
LinkDB
All DBs
Position
complement(889038..889916)
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AA seq
292 aa
AA seq
DB search
MSQRLAAQFTRPAVRVLLLLLVVALTATGCGRNNKDKAAESRPVEAIYAEAHADMTHGNW
SGAEKQFQALIAQYPYGPYTEQAQMEIAYAQYKSGKMDEAVSSIDRFLRTYPTQRNVPYM
YYLRGLANASRDTVFLQKVWRLDSSRRDLSTPLQGYSDFNTVSERYPNSRYAEDARRRMI
ELRNTFARHEMDTALYYLNRGAYIAAATRAKYILETYPQSKYQYDAVAVLAEAYTRLDNK
TLADDARRVLQMNDPQHPWLSGNWPDYPMTIRKLNPFAGEKSALDNEDARRQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcgcctcgcagcccagttcacccgccccgccgtccgcgtcctgctcctgctc
ctggtggtggccctcaccgccaccggctgtggccgcaacaacaaggacaaggccgccgag
tcccgtccggtggaggccatctacgccgaagcccacgccgacatgacccacggcaactgg
agcggcgcggagaagcagttccaggcgctgatcgcccagtacccatacggcccgtacacc
gagcaggcgcagatggaaatcgcctacgcccagtacaagtccggcaagatggacgaggcg
gtgtccagtatcgaccgcttcctgcgcacctatcccacccagcgcaacgtgccctacatg
tactacctgcgcggcctggccaacgccagtcgcgacacggtgttcctgcagaaggtctgg
cgcctggattccagccgccgcgacctgtccaccccgctgcagggttacagcgacttcaac
accgtctccgagcgctaccccaacagccgctacgccgaggatgcacgccggcgcatgatc
gagttgcgcaacaccttcgcccgccacgagatggacacggccctgtattacctgaaccgc
ggtgcctacatcgcggcggcgacccgggccaagtacatcctggaaacctacccgcagagc
aagtaccaatacgacgcggtcgccgtcctggccgaggcctacaccaggctggacaacaag
accctggccgacgatgcccgccgcgtgctgcagatgaacgacccgcagcacccgtggctg
agtggcaactggcccgactatccgatgaccatccgcaagctcaacccgttcgccggcgag
aagtccgcgctggacaacgaggacgcgcgcaggcagtga
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