Pseudogulbenkiania sp. NH8B: NH8B_0384
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Entry
NH8B_0384 CDS
T01619
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NH8B_0384 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pse03021
]
NH8B_0384 (rpoA)
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_0384 (rpoA)
Enzymes [BR:
pse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NH8B_0384 (rpoA)
Transcription machinery [BR:
pse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NH8B_0384 (rpoA)
DNA repair and recombination proteins [BR:
pse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NH8B_0384 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BAK75225
UniProt:
G2IW70
LinkDB
All DBs
Position
400906..401889
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSASEFLKPRLIDVQPVSATHARVSMEPFERGYAHTLGNALRRILLSSMPGFAPTEVT
IAGVLHEYSALDGVREDVVDILLNLKGVVLKLHGRDSVVLTLKKEGEGAVLAGDIELPHD
VEVINPDHVICHLAAGGKIDLEVKVEKGRGYQPVSVRVNQDDNRAIGTIQLDASFSPVRR
VSFGVESARVEQRTDLDRLVLDIETNGVIEPEQAVRNAARILMDQLSIFADLQGTAVEEV
VEKAPPIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGMKLENWPPAGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcgcttcggaatttcttaaaccgcgactcatcgatgtgcagccggtttcg
gctactcacgcgcgtgtatcgatggagccgtttgaacgcggttatgcccatactctgggt
aatgccctgcgtcgcattctgctctcctcgatgccgggttttgcaccgaccgaagtcact
atcgctggcgttttgcatgagtattccgctcttgatggcgttcgcgaggatgtcgttgac
atcctcttgaacctcaagggcgtggtgcttaagctgcatggtcgtgacagcgtcgttctt
accctcaagaaagagggtgagggcgctgttctggctggcgatatcgagttgccgcacgat
gttgaggtgatcaatccggatcatgtcatctgccatctggcagctggcggcaagatcgat
ctggaagtgaaggtcgagaagggtcgtggttaccagccggttagcgttcgcgttaaccag
gacgataaccgcgccatcggtaccattcaactggatgcttccttctctccggttcgccgg
gtgagctttggtgtggaaagcgcccgcgttgagcagcgtactgacctggatcgcctggtg
ctcgatatcgagaccaacggtgtgatcgaacctgagcaagccgtgcgtaacgccgcgcgc
atcctgatggatcagctgtcgatttttgctgatctgcaaggtactgcggttgaagaagtc
gttgaaaaggcgccgccgatcgatccgatcctgctgcgtccggtcgacgatcttgaactg
acggttcgttcggctaactgcctgaaggccgagaacatttactacatcggtgacctgatt
cagcgtaccgagaccgagcttctgaagaccccgaacctcggtcgcaagtccctgaatgag
atcaaggaagttctcgcgtccaaaggcctgactctcggcatgaagctggaaaactggccg
ccggcagggctggaaaaaccgtaa
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