Pseudogulbenkiania sp. NH8B: NH8B_4045
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Entry
NH8B_4045 CDS
T01619
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pse
Pseudogulbenkiania sp. NH8B
Pathway
pse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NH8B_4045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pse03400
]
NH8B_4045
Enzymes [BR:
pse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NH8B_4045
DNA repair and recombination proteins [BR:
pse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NH8B_4045
Prokaryotic type
NH8B_4045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAK78782
UniProt:
G2J299
LinkDB
All DBs
Position
complement(4237422..4238144)
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AA seq
240 aa
AA seq
DB search
MPQLDYLAPTLARVHPAWETVLRSPACFKALSQIDRTLANEAAAGKTLYPPREQIFHALS
YAAPADVRVVILGQDPYHGAGEAMGLSFSVPPGVRIPPSLRNIYKEIAADLGTGLPASGD
LTPWARQGVLLLNSVLTVEADKAGSHGKPGWQNVSDALIDAVNTENPGCVFLLWGNWAQG
KAERIDTRRHKVLCAAHPSPLSASRGFHGCRHFSQANAWLAAAGRSVIEWAPAAEQSLLF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaactcgactatctcgcccccaccctcgcccgcgtccatcccgcctgggagacc
gtgctgaggtcgcctgcgtgtttcaaggccctgagccagatcgaccgcaccctcgccaat
gaagccgccgccggcaagaccctctacccgccgcgcgagcagatcttccacgccctgagc
tacgccgccccggccgacgtgcgcgtcgtcatcctcggccaggacccctaccacggtgcc
ggcgaggccatgggactgtcgttctcggtaccgccgggcgtgcgcatcccgcccagcctg
cgcaacatctacaaggaaatcgccgccgatctcggcaccggcctgccggcttcgggcgac
ctgacgccttgggcgcggcaaggcgtgctgctgctcaacagcgtgctgacggtggaggcc
gacaaggccggcagccacggcaagccgggctggcagaacgtcagcgacgcgctgatcgac
gccgtcaacaccgagaaccccggctgcgtgttcctgctgtggggcaactgggcgcagggc
aaggcggaacgcatcgacacgcgccgccacaaggtgctgtgcgccgcccacccctcgccg
ctgtcggccagccgcggctttcacggctgccgtcacttctcgcaggccaacgcctggctc
gccgccgccgggcgcagcgtgatcgagtgggcacccgccgccgaacaatcgctgctgttt
tga
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