Pseudorhodobacter turbinis: EOK75_04890
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Entry
EOK75_04890 CDS
T05954
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb03030
DNA replication
pseb03410
Base excision repair
pseb03420
Nucleotide excision repair
pseb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EOK75_04890 (polA)
03410 Base excision repair
EOK75_04890 (polA)
03420 Nucleotide excision repair
EOK75_04890 (polA)
03440 Homologous recombination
EOK75_04890 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pseb03032
]
EOK75_04890 (polA)
03400 DNA repair and recombination proteins [BR:
pseb03400
]
EOK75_04890 (polA)
Enzymes [BR:
pseb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EOK75_04890 (polA)
DNA replication proteins [BR:
pseb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EOK75_04890 (polA)
DNA repair and recombination proteins [BR:
pseb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EOK75_04890 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EOK75_04890 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QCO55169
UniProt:
A0A4P8EEK9
LinkDB
All DBs
Position
1042450..1045230
Genome browser
AA seq
926 aa
AA seq
DB search
MSDTFGKGHHLHLIDGSAYIFRAYHALPPLTRKSDGLPVGAVAGFCNILFRYLNGNKGAD
APTHVAVIFDHSSKTFRNDIYPEYKANRPELPEDLRPQFPLTRDATRAFNIACIETEGYE
ADDIIATLSCRARDAGGRVTIISSDKDLMQLVGDGVGMLDPMKNKLIGPDEVFEKFGVAP
NRVVDVQSLAGDSVDNVPGAPGIGIKTAALLIQEYGDLESLLERAGEIKQPKRRESLINN
ADLIRISKRLVQLDCDTPLEDSFDSMAVNPPEAEELLKFLTEMEFRTLTKRVADSLKVEA
PTPPAVVEDKPDLPFDHAKYENVSTADALGKWIDRIYARGYVAVDTETTSLDEMRADLVG
ISLCVEAGQACYIPLGHKQGGGDLFGSSELSDGQMPMGEALEMLRPMLCDASILKIGQNM
KYDAKIFACQGVEVTPIDDTMLMSSALNAGLHNHGMDTLADKYLGHTPIPIKSLLGSGKS
QITFDLVPVDEAVKYAAEDADITLRLWQLFKPQLHRKSVTTVYETLERPLVPVLAKMEMT
GIQVDRDTLSRMSNTFAQKMGALEAEIQTLAGRSFNVGSPKQLGEILFDEMGLQGGKKGK
TGAYATGADVLEDLATEHELPGKVLDWRQLAKLKSTYTDALQDHINPETGRVHTSYSLVG
AVTGRLSSTDPNLQNIPVRSEEGRRIREAFVAPKGRVMVSLDYSQIELRILAHIAEIPAL
KQAFKDGIDIHAMTASEMFGVPVEGMDPMVRRQAKAINFGVIYGISGFGLARNLRIPRGE
AQGFIDRYFERFPGIREYMDATTQFAKDNGYVQTLFGRRIHTPEINAKGPAAGFAKRAAI
NAPIQGTAADIIRRAMVRMPDATRDLDAKMLLQVHDELIFEVAEDAVDPLIKIAREIMEG
AALPAVHLSVPITVDAGQGANWAEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacactttcggcaagggccaccacctgcatctgatcgacggatcggcctatatt
ttccgtgcctatcacgcgctgccgccgctgacgcggaaatcggatgggctgccggtgggc
gcggttgcggggttttgcaacatcctgttccgctatctcaatggcaataaaggggccgat
gcgccgacccatgtggcggtgatctttgaccattcctcaaaaaccttccgcaacgacatt
taccctgaatacaaggccaaccgccccgaactgcccgaagatctgcgcccgcagttcccg
ctgacccgcgacgcgacccgcgccttcaacatcgcctgcatcgagaccgaaggctatgag
gccgatgacatcatcgccacactttcctgccgtgcgcgcgatgcgggcgggcgggtgacg
attatttcctcggataaggatttgatgcagttggtcggtgacggggttggcatgctcgac
ccgatgaagaacaagctgatcgggccggatgaggtgttcgagaaattcggcgtggccccg
aaccgcgtggttgatgtgcaatcgctggccggtgattcggtcgataacgtgccaggcgcg
ccggggattggcatcaagaccgccgccctgcttattcaagaatacggcgatctggaaagc
cttttggagcgtgcgggggaaatcaaacaacccaaacgccgcgaaagcctgatcaacaat
gccgacctgatccgcatctccaagcgactggttcagcttgattgcgacaccccgctggag
gacagctttgacagcatggccgtcaatccgcccgaggcagaggagctgctaaagttcctt
accgaaatggaattccgcaccctgaccaaacgcgtggccgacagcctgaaagtcgaggcc
cccaccccgccagctgtggttgaggacaagcccgatctgccctttgaccatgccaaatat
gaaaacgtcagcacggcggatgccttgggaaaatggatcgaccggatctatgcgcgcggc
tatgtcgcggtggataccgagaccaccagccttgacgagatgcgcgccgatctggtcggt
atttcgctttgtgtcgaggcgggacaggcctgctatatcccgctgggccacaagcaaggc
ggcggtgatctgttcggctcgtcggagctgagtgatgggcagatgccgatgggtgaggcg
ctggaaatgctgcgcccgatgctgtgtgatgcaagcatcctgaaaatcggccagaacatg
aaatatgacgcgaagatctttgcctgccaaggggttgaggttacgccgattgatgacacc
atgctgatgagttcggcgctcaacgcggggctccacaatcacggcatggatacgctggcc
gataaatatctgggccacacaccaatcccgatcaaatccttgcttggctctggcaaatcc
cagatcacctttgatttggtgccggtcgatgaggcggtgaaatacgccgccgaggatgcc
gatatcaccctgcgtctgtggcaattgttcaagccacagcttcaccgcaaatccgtcacc
accgtctatgaaacgctggaacgcccgctggtgccggttctagccaagatggaaatgacg
ggcattcaggtggaccgcgatacgctgtcgcgcatgtccaacaccttcgcgcagaaaatg
ggcgcgctggaggccgagatccagacccttgcggggcggtcattcaacgtcgggtcgccc
aaacagctgggtgagattttgtttgacgagatgggcctgcagggcgggaaaaagggcaaa
accggcgcctatgccaccggcgccgatgtgttggaagacttggcgaccgagcatgaattg
ccgggaaaagtcctcgattggcgccagcttgccaagctgaaatccacctataccgatgcg
ctgcaggaccacatcaaccccgaaacgggtcgcgtgcatacgtcttattcgctggtgggg
gcggtcacggggcggctttcgtcaaccgatccgaacctgcaaaacatccccgtgcgcagc
gaggaaggccgccgcatccgcgaggctttcgtagcgcctaaaggccgcgtgatggtcagc
ctcgactatagccagatcgagctgcgcattcttgcccatatcgctgaaattcctgctttg
aaacaggcctttaaggacggtatcgacattcacgccatgaccgcatcggaaatgttcggc
gtccctgttgaggggatggaccccatggtgcgccgacaggccaaggcgatcaattttggc
gtgatctatggcatttccggctttggtctggcgcgcaatctgcgtattccgcggggcgag
gcgcagggattcatcgaccgctatttcgagcgtttccccggcattcgcgaatatatggac
gcgacgacccaattcgccaaggataacggctatgtccaaacgctgttcggtcgccgtatc
cacacgcctgaaatcaacgccaaaggtcccgccgcaggctttgccaaacgcgccgccatc
aacgcgccgatccaaggcacggccgccgatatcatccgccgcgccatggtgcgcatgccc
gatgccacccgcgatctggatgcaaaaatgctgctgcaagtccacgatgaattaatcttt
gaggtggccgaggatgccgttgatccgctgatcaaaatcgcgcgcgagatcatggaaggt
gcggccctgcccgccgtgcatctgtcggtgccgatcaccgtggatgcaggccaaggcgca
aattgggccgaggcgcactga
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