Pseudomonas sp. CCOS 191: CCOS191_2869
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Entry
CCOS191_2869 CDS
T03967
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCOS191_2869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psec03021
]
CCOS191_2869
Transcription machinery [BR:
psec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCOS191_2869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_Tnp_ISL3
HTH_28
HTH_29
Motif
Other DBs
NCBI-ProteinID:
CRI57405
UniProt:
A0A0F7XYS8
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All DBs
Position
I:complement(3270624..3271208)
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AA seq
194 aa
AA seq
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MLLANVLKSIRISLIYTRISVPLMTESTAAPEPSLSALYQAHRGWLQGWLQRRLGDTWAA
ADLTQDTFLRVLAAQQARTLPSLREPRAYLLTVGRRLLVNHYQRRSLEQAYLEDLRQLPE
AQAASPEQRWLLLETLQALDELLDGLPRPVRQAFLWSQLEGLDYASIAARLRVSERTVKR
YMVRAYEHCLLVDL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgctattggccaatgtactgaagtcaattagaatcagtctcatttacacccgcatcagc
gtgccattgatgaccgagtccactgcggcacccgaaccctcgctaagcgctctctatcaa
gcacatcgcggctggctgcagggctggctccaacggcgcctgggcgacacctgggcggct
gccgacctgacccaggacaccttcctgcgcgtgctggccgcgcagcaggcccggaccctg
cccagcttgcgcgaacccagggcgtacctgctcaccgtcggccgtcggctgctggtcaat
cactatcaacgacgttccctggaacaggcctatctcgaggatctgcgccagttgcccgaa
gcgcaggcagcgtccccggagcagcgttggttgctgctggaaaccctgcaggccctcgat
gaactgctcgatggactgccccgcccggtgcgccaggcgtttctctggtcgcagctggag
ggcctggactacgccagtatcgccgcccgcctgcgggtcagtgagcgcacggtcaagcgc
tacatggtcagggcctacgagcattgcctgttggtggatctgtga
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