Stutzerimonas frequens: DM292_10905
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Entry
DM292_10905 CDS
T05921
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psed
Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psed03009
]
DM292_10905
Enzymes [BR:
psed01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DM292_10905
Ribosome biogenesis [BR:
psed03009
]
Prokaryotic type
ribosomal protein modification factors
DM292_10905
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GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
RNase_II_C_S1
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
AWT10656
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Position
2379904..2381226
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AA seq
440 aa
AA seq
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MSKTPTVGFVSLGCPKATVDSERILTQLRMEGYQIVPSYEDADVVVVNTCGFIDSAKAES
LDAIGEAIAENGKVIVTGCMGVDENNIRGVHPSVLAVTGPQQYEQVVNAVHEVVPPSIEH
DPFVDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERLV
KAGVKEVLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEELGKMGVWVRLHYVYPYP
NVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKQWREICPELTIRS
TFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPAETMGLEPVPDEIKQDRWD
RFMAHQQAISAARLQLKVGKELDVLIDEVDDDGAIGRSWADAPEIDGMVYVDSEQPLQPG
DKVRVRVTNADEYDLWAEVI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacgccaacagtcgggttcgtcagcctggggtgccccaaggccacggtcgac
tctgaacgcatcctcacccagctgcgcatggagggttaccagatcgtgccgtcctacgag
gatgccgatgtggtggtggtcaacacctgcggcttcatcgacagcgccaaggccgaatcg
ctggatgccattggcgaggcgatcgccgagaacggcaaggtgatcgtcaccggctgcatg
ggcgtggacgagaacaacatccgtggcgtgcaccccagcgtgctggcggttaccggcccg
cagcagtacgagcaggtggtcaatgcggtgcacgaagtggtgccgccgagcatcgagcac
gatcctttcgtcgatctggtgccgccgcagggcatcaagctcaccccgcgccactatgcc
tatctgaagatttccgaaggctgcaaccatacctgcagcttctgcatcatcccgtccatg
cgcggcaagctggtcagccgcccggtgggcgatgtgctcagcgaggccgagcgcctggtc
aaggccggcgtgaaggaagtcctggtgatcagccaggacaccagcgcctatggcgtggac
ctcaagtacaagctggatttctggaacggccagccggtcaagacgcgcatgctcgagctg
tgcgaggagctgggcaagatgggcgtctgggtgcgcctgcactacgtctacccctacccc
aacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtacctggacatc
cccttccagcacgccagcccaaaggtgctcaaggccatgaagcgtccggccttcgaggac
aagaccctggcgcgcatcaagcagtggcgcgagatctgccccgagctgaccatccgctcg
acctttattgtcggcttccccggcgagaccgaggaagacttccagtacctgctcgactgg
ctgaccgaagcccagctcgaccgcgtcggctgcttccagtattcgccggtcgaaggcgca
ccggccgagaccatgggcctggaaccggtaccggatgagatcaagcaggaccgttgggac
cgcttcatggcgcaccagcaggccatcagcgccgcgcgcctgcagctgaaggtcggcaag
gagctggacgtgttgatcgacgaagtggacgacgacggtgccatcggccgctcctgggcc
gacgccccggagatcgacggcatggtctacgtcgacagcgaacagcctctgcagccgggc
gacaaggtccgcgtgcgtgtcaccaacgccgacgagtacgacctctgggccgaagtgatc
tga
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