Pseudonocardia sp. HH130629-09: XF36_01325
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Entry
XF36_01325 CDS
T04082
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseh03016
]
XF36_01325
Enzymes [BR:
pseh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
XF36_01325
Transfer RNA biogenesis [BR:
pseh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XF36_01325
Prokaryotic type
XF36_01325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ALE81936
UniProt:
A0A0M4QC35
LinkDB
All DBs
Position
268667..269479
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AA seq
270 aa
AA seq
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MRLRLDVAYDGTDFSGWAQQPTRRTVQGVLTEALSTVLRTPLRLTVAGRTDAGVHASGQV
CHVDLPATLAPQIDGLLRRLNRLLPPDVRVHDLGQVPDAFDARFSALRRHYRYRVTTAPF
GAEPLRARETVAWPYPLDPVPMNAASALLLGEHDFAAFCKRREGATTVRALQRFDWSPAP
GEPGVLVAAVSADAFCHSMVRSLVGAVFEVGRGRRPVDWPAGLLRREVRASEVTVAPPHG
LSLTGVDYPADDELAARAERTRRTRVPGEG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgcgactcgacgtcgcctacgacggcaccgacttctccgggtgggcgcagcag
ccgacccggcgcaccgtgcagggcgtgctcaccgaggcactgtcgaccgtgctgcgcacc
ccgctgcggctcaccgtcgccggacgtaccgacgccggggtgcacgcctcagggcaggtc
tgtcacgtcgacctcccggcgaccctcgccccgcagatcgacggtctgctccggcggctg
aaccggctgctgccgccggacgtgcgggtgcacgacctcgggcaggtgcccgacgccttc
gacgcccgcttctccgcgctgcgccgccactaccgttaccgggtcaccacggccccgttc
ggtgccgagccgctgcgggcgcgggagaccgtcgcctggccgtacccattggacccggtg
ccgatgaacgccgcctcggcgctgctgctgggcgagcacgacttcgccgcgttctgcaag
cgccgcgagggcgcgacgaccgtgcgcgcgctgcagcgcttcgactggtcgcccgcgccg
ggtgagccgggtgtgctcgtcgcggcggtctcggcggacgcgttctgccactcgatggtc
cggagcctggtcggcgcggtgttcgaggtcggccgtggacgcaggcccgtcgactggccc
gcggggctgctgcgccgcgaggtgcgtgcctccgaggtgaccgtcgcgccgccgcacggc
ctgtcgctgaccggcgtcgactaccccgccgacgacgagctcgccgcccgcgccgagcgg
acccggcggacccgggtgccgggcgagggctga
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