Pseudodesulfovibrio cashew: GM415_00325
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Entry
GM415_00325 CDS
T06353
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel00550
Peptidoglycan biosynthesis
psel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GM415_00325 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psel01003
]
GM415_00325 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
GM415_00325 (pbpC)
Enzymes [BR:
psel01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
GM415_00325 (pbpC)
Glycosyltransferases [BR:
psel01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GM415_00325 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
GM415_00325 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
DUF6052
Motif
Other DBs
NCBI-ProteinID:
QGY41932
UniProt:
A0A6I6JNX3
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All DBs
Position
61576..63843
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AA seq
755 aa
AA seq
DB search
MAALLVFMALNALFPFPEERLYPPSGMRVLDRNGTELRRFPASDTMWRFPVTLDRVSPQL
IEALIESEDRWFYVHPGVNPLAVLRAAWGNLLAGRVVSGASTIPMQIARMTEPSERTLAA
KLAEAFRALQLSLTHSKKELLGIYLNTAPFGGNIVGVDAASRLYFGRPPDRLSLGECALL
AVLPRSPNRYDPARHPEAAMRVRDRVLKQLAERGAVDAEEARRAMRQPMVAHRRPSPMLA
PHFTLLARQRLGAETELRTSLDLAAQHTVEHLLARHIARVRQQGISNGAVVVLDRRTRQV
LAMAGSADFFDDQRQGQVNNGLAPRSPGSALKPFLYALAFDKGLAIPESRLLDVPTDYAG
YAPENYSGTFSGQVTASEALARSLNVPAVRLLARTGLKEFHALLRTGGLETVDRPAASYG
LPLVLGACEVRLVDLVNLYATLAQGGTHRPWRITPGEQKTGTPLFSTEAARSVADILTTV
TRPDMPESWRLTRDRPAAAWKTGTSFGHRDAWAVGFGPTLAVGVWVGNPDGTPVKGISGA
THAGPLFFDILHALESPSRDLRLPDAPDLRKVRLCAFSRMPAGPDCPETITAMAGPKMIL
PRCTAHKRYMADRKTGLRLQGSCLALRPAVSRVAATVPPELAAWLKAQGKPVPALPALSP
ACTDVPEGSGPNILSPSARTPYVMRHDAPARFQQIALRAETADPDQPLWWYVDGDFAGSA
KPGAPLFLPMVPGEHAASVTDSQGRTNSVRFTVIE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgctggtcttcatggccttgaacgcgctcttcccgttcccggaggagcgg
ctttacccgccgtccggcatgcgggtgctggaccgcaatggcacggagctgcgccgcttt
ccggcgtccgataccatgtggcgctttccggtcactctggaccgggtctcgccgcaactg
atcgaggccctgatcgagtccgaggaccggtggttttacgtccatccgggcgtgaacccc
ctggccgtgctccgcgccgcctggggcaatctcctggccgggcgcgtggtctccggggcg
tcgaccatccccatgcagatcgcccgaatgaccgaacccagcgagcgaactctcgctgcc
aagctggccgaggccttccgcgccctgcaactgagcctgacccactccaagaaggagctg
ctcggaatctacctgaacaccgcgcccttcggcggcaacatcgtgggcgtggacgcggcc
tcgcgcctctactttggcaggccgccggaccgcctctccctgggtgaatgcgccctgctg
gccgtgctgccgcgctcgcccaaccggtatgacccggcccgccaccccgaggcggccatg
cgcgtgagagaccgcgtcctcaagcaactggctgaacgcggcgcggtggatgcggaggaa
gcccgccgggccatgcgccagcccatggtggcccaccgccgcccctcgcccatgctcgcc
ccccacttcaccctgctggcgaggcagcgtctgggcgcggagacggagctgcggacctcg
ctggacctcgcagcccaacacaccgtggagcacctgctggcccggcatattgcccgcgta
aggcagcagggcatttccaacggggcggtcgtggtcctcgacaggcgcacgcgccaggtg
ctggccatggccgggtccgccgacttcttcgacgaccagcgccaggggcaggtcaacaac
gggctggccccgcgctcgccgggttcggccctcaagccgtttctctacgccctggccttt
gacaagggactggccatccccgagtcccggctgctcgacgtccccacggactacgcgggc
tacgcgccggagaattactcaggaaccttttccggccaggtcaccgcgtccgaggccctg
gcccgctccctcaacgtcccggcggtgcgcctgttggcccgcaccgggctcaaggagttt
cacgccctgctccgaaccggcggactggagaccgtggaccgcccggcggccagctacggc
ctgcccctggtcctcggcgcatgcgaagtccggctcgtggacctggtgaacctgtacgcc
accctggcccagggcgggacccaccgcccctggcgcatcacccccggtgagcagaaaacg
ggcacgccgttgttctcgaccgaggccgcacgctccgttgccgacatcctgaccaccgtg
acccggccggacatgcctgagtcctggcggctgacacgggacaggcccgcagcggcgtgg
aagacgggcacctccttcggccatcgcgacgcctgggccgtgggcttcggccccaccctg
gccgtaggcgtatgggtgggcaacccggacggtacgccggtcaagggtatttctggcgca
acccacgccggcccactcttttttgatatcttgcacgctctggagtccccctcgcgcgac
ctgcgcctgccggatgcgcccgacctgcgaaaggtccggctgtgcgccttcagccgcatg
cccgccgggccggactgcccggagacgatcacggccatggccggaccgaaaatgatcctg
ccacgctgcaccgcccacaagcgatacatggctgaccggaagaccggccttaggctccag
gggagctgcctggccctcaggcccgccgtatcccgcgtggcagcaaccgtgcccccggag
ctggccgcctggctcaaggcgcagggaaagccggtcccggccctgcccgcgctcagcccg
gcctgcaccgacgtgcccgaggggagcggcccgaacatcctctcaccctcggccaggaca
ccctacgtaatgcgccacgacgccccggcccgcttccagcagatcgccctgcgcgccgag
actgccgacccggaccagcctttatggtggtatgtggacggcgattttgcgggcagcgca
aagcccggcgcgccgctcttcctgcccatggtgccgggcgagcacgccgcatccgtcacg
gacagccagggccggacgaactcggtccggttcacggtaattgaataa
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