Pseudodesulfovibrio cashew: GM415_14900
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Entry
GM415_14900 CDS
T06353
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GM415_14900 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_14900 (uvrB)
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM415_14900 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GM415_14900 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
P-loop_SecA
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QGY41356
UniProt:
A0A6I6JET3
LinkDB
All DBs
Position
complement(3256142..3258139)
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AA seq
665 aa
AA seq
DB search
MPDFRLVSDFTPKGDQPEAIEELTTGLRAGVRDQVLLGATGTGKTFTMANVVAGLNRPAL
VLAPNKTLAAQLYTEFRSLFPDNAVEYFVSYYDYYQPEAYLPHSDVYIEKDSSINDNIDK
LRHSATHAILTRSDVLVVASVSCIYGLGSPDFYAKMVIPVEEGQTMAMESLLSRLVEIHY
ERNDYDFHRSTFRVRGDVVEIIPAYSREKALRIEFFGDEIDSIAETDPLTGEVKDRLRKT
VIYPGSHFVSDRENLDRAVDDIRNELQVRLAELKGANKLVEAQRLEQRTMYDLEIIEELG
YCNGIENYSRHLDGRTEGQPPSTLLDYFPEDFILFVDESHIALPQVGGMYNGDRSRKTTL
VDFGFRLPSALDNRPLNYEEFQGRVHQAVYVSATPGPLELDLAQGVVVEQIIRPTGLLDP
EVEVRKVQGQIDDLLAECKKRQSRDERVLVTTLTKRMAEDLNDYLNSMGVPARYLHSDID
TLERMAIIQALRAGEFFVLVGINLLREGLDIPEVSLVAILDADKEGFLRSNRSLIQTFGR
AARNVGGRVILYADKVTGSMAEAMEETERRREKQQQYNVDHGITPMTIRKKVENLFGELG
GGSGQTVAMAAEPAAEYGSDPKVLRKTVKRLEREMREAAKELAFERAAELRDSIALLQER
ILELG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgccggatttcagacttgtcagcgattttactcccaagggagatcagccggaggccatc
gaggagctcacgacggggttgcgcgcaggggtacgagatcaggttttgcttggcgccacc
ggtacgggcaagaccttcactatggccaacgtagtggccggactgaatcggcccgccctg
gtgctcgcgcccaacaagacactggccgcgcagctctacaccgaattccgttctctcttt
cccgataatgctgtcgagtacttcgtaagttattatgactattaccagcctgaggcctac
ctgccgcactcggacgtctacattgagaaagattcgtccataaacgacaatatagacaag
ctccggcactccgccacccatgcgatcctgacccggagcgacgtgctggtcgtggcctcg
gtttcctgcatctatggattgggctcacccgatttttatgccaaaatggtcatccctgtt
gaagaagggcagaccatggccatggagtcccttttatcgcggctggtggagattcactat
gagcgcaacgactatgatttccatcgcagcacattccgcgttcggggagacgtagtggaa
atcatcccggcctacagccgggagaaggccttgcgcatagagttcttcggtgacgagatc
gactccattgccgagaccgatccgctgaccggcgaagtcaaggaccgccttcgcaagacc
gtcatctatccaggcagccacttcgtgtccgaccgtgaaaacctggatcgcgcggtggat
gacattcgcaatgaattgcaggtgcgcctggccgaattgaaaggcgcgaacaagctggtc
gaggcccagaggctggaacagcggaccatgtatgacctcgagatcatagaagagcttggc
tactgcaacggcatcgagaactactcccgccaccttgacgggcggaccgagggacagcct
ccatccaccttgctcgactatttcccggaagatttcattctgttcgtggacgagtcccat
atcgccttgccgcaggtgggcgggatgtataacggcgacagatcacgcaagaccacgctg
gtggatttcggatttcggttgccctcggccctggacaaccgtccgctcaactatgaggaa
ttccagggtcgggtgcatcaggccgtctatgtttcggccacgcccggtcccttggagctg
gacctggctcagggcgtcgtagtggaacagatcattcgtccgacgggactgcttgatcct
gaggtcgaggtccgaaaagtacagggacagattgacgatttactggcagaatgtaaaaag
agacagtcacgggacgagcgggttctggtcaccactttgaccaagcgcatggccgaggat
ttgaatgattatctcaactccatgggcgttcctgctcgttacctgcattcggatatcgac
accctggagcgcatggccatcatccaggctctgcgggcgggggaattcttcgtgctggtg
ggaatcaacctgcttcgggaagggctcgatatacccgaggtgtccctggttgcgattctg
gatgcggacaaggaagggttcctgcgttccaaccggtctcttatccagactttcggcagg
gcggcgcgcaatgtcggaggaagggtgatcctctatgcggacaaggtcaccgggtccatg
gctgaagccatggaggagaccgaacggcggcgtgaaaagcaacagcaatataatgttgat
cacggcattacgcccatgaccatccgcaagaaggtggagaatctgttcggcgagttggga
ggcggtagcggccagaccgtggccatggcagccgagcccgccgccgagtatggctcggat
ccgaaagtattgcggaagacagtcaagcggttggagcgggaaatgcgagaggccgccaag
gagctggccttcgagcgggcggccgaacttcgggacagcatagccttgttgcaggaaaga
attttggagctggggtag
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integrated database retrieval system
