Pseudomonas sp. MRSN12121: TO66_00020
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Entry
TO66_00020 CDS
T03702
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psem03032
]
TO66_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_00020 (gyrB)
Enzymes [BR:
psem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TO66_00020 (gyrB)
DNA replication proteins [BR:
psem03032
]
Prokaryotic type
DNA Topoisomerases
TO66_00020 (gyrB)
DNA repair and recombination proteins [BR:
psem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TO66_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJO75746
UniProt:
A0A0C5DWL8
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All DBs
Position
4357..6774
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AA seq
805 aa
AA seq
DB search
MSEENTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISITIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELVLTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTQIHFKASQETFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQV
FHFNVQREDGIGVEIALQWNDSFNENLQCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMLDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
REEYNIEKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNEDAPGISGEALERLVNDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVTLEQLSDHAAMQDWLARFDARLRSSEKSGLVYKASLREDRERNV
WLPEVELISHGLSSYVTFNRDFFGSNDYKTVVSLGAQLSTLLDEGAYVQRGERKKAVTEF
KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacacgtacgactcaagcagcattaaagtgctgaaaggtttggatgcc
gtacgcaaacgtcccggtatgtacattggtgacaccgacgatggcagcggtctgcaccat
atggtgttcgaggtggtcgataactcgatcgacgaagctctggccggccactgcgacgac
atcagcatcaccatccacccggacgaatccatcaccgtgcgtgacaacggtcgtggcatc
ccggtagacgtgcataaagaagaaggcgtttccgcggccgaggtcatcatgaccgtgctg
cacgccggtggtaagttcgacgacaactcctacaaggtttccggcggtctgcacggcgta
ggtgtgtcggtagtgaacgccctgtccgaagagctggtcctgaccgttcgccgcagcggc
aagatctgggaacagacctatgtgcacggtgtgccccaggcgccgatggcgatcgtgggc
gacagtgaaaccaccggtacccagatccacttcaaggcttcccaggaaaccttcaagaac
attcacttcagctgggacatcctggccaagcgtattcgtgaactgtccttcctcaactcc
ggcgtgggtatcgttctgaaggacgagcgctccggcaaggaagaactgttcaagtacgaa
ggcggcctgcgcgcattcgttgaatacctgaacaccaacaagaccgcggtcaaccaggtg
ttccacttcaacgtgcagcgtgaagacggtatcggcgtggaaatcgccctgcagtggaac
gacagcttcaacgaaaacctgcagtgcttcaccaacaacatcccgcagcgcgacggcggt
actcacctggtgggcttccgttcggcactgacccgtaacctgaacaactacatcgagcag
gaaggcctggcgaagaagcacaaggtcgccaccaccggtgacgatgcccgcgaaggcctg
accgcaatcatctcggtcaaggtgccggatccgaagttcagctcccagaccaaggacaag
ctggtgtcttccgaagtgaagaccgcggtcgaacaggaaatgggcaagtacttctccgac
ttcctgctggaaaacccgaacgaagccaagctggtggtcggcaagatgctcgacgccgcg
cgtgcccgtgaagcggcgcgtaaagcccgtgaaatgactcgtcgtaaaggcgcgctggat
atcgctggcctgccgggcaagctggcggactgccaggaaaaggaccctgccctttccgaa
ctgtacctggtggaaggtgactctgctggcggctccgccaagcagggacgcaaccgcaag
acccaggcgatcctgccgctcaagggcaagattctcaacgtcgagaaagcacgcttcgac
aagatgatttcctcgcaagaggtcggcaccttgatcacggcactcggttgcggcatcggc
cgcgaagagtacaacatcgagaagctgcgttatcacaacatcatcatcatgaccgacgcc
gacgtcgacggttcgcacatccgcaccctgctgctgaccttcttcttccgtcagttgccg
gagctgatcgagcgcggctacatctacatcgcgcagccgccgctgtacaaggtcaagaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagagtacatgacgcagtcg
gccctggaagatgccagcctgcacctgaacgaagacgcaccgggtatttccggcgaggcg
ctggagcgcctggtgaacgacttccgcatggtgatgaagaccctcaagcgcctgtcgcgc
ctgtacccacaggagctgaccgagcacttcatctacctgccggccgtgaccctggagcaa
ctgtccgatcacgcagcgatgcaggattggctggctcgcttcgatgcccgcctgcgttcc
tccgagaagtcgggcctggtctacaaggccagcctgcgtgaagaccgtgaacgtaacgtc
tggctgccagaggtcgaactgatctcccacggcctgtcgagctacgtcaccttcaaccgc
gacttcttcggcagcaacgactacaagacagtcgtttcccttggcgctcaactgagcacc
ctgctggacgaaggcgcatatgtgcagcgcggcgagcgcaagaaagccgtgactgagttc
aaggaagccctggactggctgatggcggaaagcaccaagcgccacaccattcagcgatac
aaggggctgggcgagatgaacccggatcagctgtgggaaaccaccatggacccgaccgtg
cgccgcatgctcaaggtcaccatcgaagacgccatcggtgccgaccagatcttcaacacc
ctgatgggtgatgcggtcgagcctcgtcgcgacttcatcgaaagcaacgccctggcggtg
tccaacctggacttctga
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