Pseudoalteromonas sp. NC201: PNC201_10575
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Entry
PNC201_10575 CDS
T05464
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psen
Pseudoalteromonas sp. NC201
Pathway
psen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PNC201_10575 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psen03400
]
PNC201_10575 (recB)
Enzymes [BR:
psen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PNC201_10575 (recB)
DNA repair and recombination proteins [BR:
psen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PNC201_10575 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AUJ70405
UniProt:
A0A2K9JY56
LinkDB
All DBs
Position
complement(2514337..2517873)
Genome browser
AA seq
1178 aa
AA seq
DB search
MEMLNPITMPLSGQNLIEASAGTGKTYTITGLYLRYLLGLRTSDQQHEPLSVEQILVVTF
TEAATQEIKDRVRKRIIQARDVLLGEVCKDELINAILAQIEDKKRAFDLLDAAAKSMDEA
AIFTIHGFCQRMLKQHAFESKVAFNLEFILDESELIDAAMADHWRRFVYPLDTEKTQAVI
EQFATPYALAKQVRPLLARENAEIKPSVSLDAVFAAREKYQTLALWLKAEIVKTDYINVL
KKSGLAGNRAPGRKDNLQALENYVNSEQWWFEFGSSNHSFGLWGSESLADVAQYKKNTTP
LEHELIRHFDTLAELHQLVGSGLKFALVQQAVTEVRALLHAHKEEYGLISPDDLLKQLYQ
ALMGDSGERLAEKIALQYPVAMIDEFQDTDPIQYGIFSRVYAKENTALTLIGDPKQAIYG
FRGADIFTYIGAKQGVAQDRQYTLATNYRSDSDVVAAVNTIFTRHPNSFIYNKDIPFIEV
SAQGKAEDAQFTIASKKSSALRFSVLPSEDEALNKSAAQARLSQAFAGRVAALIEQGRSG
VAKIGENPVVPADICVLVRDRIEASLIKRALNQLDIASVYLARDSVFRQPLAIALYQLLD
VLHGSYDEAALRGVLAGPLFYLNNQALYDLQFNEQQWQGYLQLFSELTQLWYRSGAMAML
EHLLITCELPVIWQQQGMEVERWLTDFRHLAELLQHKQLELDGTGRVLRWFLSQLNNAQS
GSSQIRLESDANLVKIVTMHASKGLEYPIVFMPFALGFREPDTLVYHQGDKLVVDLEASD
DAKEKAEQERLAEDIRLLYVALTRAVHYCELGLYDIQQGRSKKSALHKTALGFALFGTET
FDSAEAWQSALSQLCKAHAAMECVRLDEITTPQQAINTRLEDKPLALSAKTFSGQVERHW
RTTSFSQLSYHTHHGDKPTGAVDENHLLDLPEQRQEREKTSYTFPKGAKPGSCLHEIFEL
IDFTAPHSPKNEDKYTLTEAITKSLDKFGIATEWQETAERWITSCLAASLAPHPHLQLGV
LPPDDCIVEMEFYLPLKPLSAVKLNKILSDITGQKSFLNFDDVTGMLKGFIDLIFKWQGQ
FFVLDYKSNYLGDSPEDYHYDNLNAAMSSHQYHLQYMIYTVALHRLLKQRLVDYNPEQHL
GGNYYLFLRALPDNQGIFFNQLSVKQVLELDALFEESV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcttaaccccattactatgcctttaagtggccaaaacctaattgaagccagt
gcaggcacggggaaaacttacaccatcaccggtttatatctgcgttatttactaggcttg
cgcacttctgatcaacaacatgagccgttaagcgttgaacaaatcttagtggtaactttc
acagaagcggcaacacaagagatcaaagaccgagtgagaaaacgcattattcaagctcga
gacgtgctactaggtgaagtctgtaaagatgaactgatcaatgccattttggcgcaaatt
gaagataaaaagcgcgcctttgatctccttgatgctgccgctaagtcaatggatgaggcc
gcgatattcaccattcatggcttttgccaaagaatgctgaagcaacacgcttttgagtct
aaggtggcatttaacctcgaatttattctcgatgagagcgagctgattgatgccgcgatg
gcagatcattggcgacgttttgtctacccgctagacacagaaaaaacacaggctgtgata
gagcaatttgctacgccttatgcactggcgaagcaagttagaccgttattagcaagagaa
aatgccgaaattaaaccctctgtttccttagatgcagtgtttgccgcacgtgaaaaatac
caaacattagcactgtggctaaaggccgaaatagtcaaaactgactacatcaatgtgttg
aaaaaatcggggctggcaggcaatcgtgcaccagggcgaaaggataaccttcaagctctt
gagaattatgtcaacagtgagcagtggtggtttgagtttggtagcagcaatcactcgttt
ggactttggggcagtgaaagccttgctgatgttgctcaatataaaaagaatacaacgccg
ctggagcacgaacttattcgtcactttgataccttggcagagctccaccaattggtcggg
agtgggcttaaattcgcgttagtgcaacaagcggtgactgaggtaagagctttgcttcac
gcccacaaagaagaatatggcttgatctctcccgacgatttacttaagcagctgtatcaa
gcgcttatgggcgatagtggtgagcgcttagccgaaaaaatcgcactgcaatatccggtt
gctatgatagatgagtttcaggataccgatcccatacaatatgggatcttcagccgagtt
tacgcaaaggaaaatacggcattaaccttgataggcgacccaaaacaagccatttacggc
tttcgcggggcggatatttttacttatatcggtgcaaagcaaggagttgcgcaagacagg
cagtatacgcttgcaaccaattatcgctccgatagtgatgtggttgccgcagtgaatacg
atatttactcgtcaccccaatagttttatctacaataaagatatccctttcattgaggtg
agcgcgcaaggtaaagccgaggatgcgcaatttactatcgcgtctaaaaagtcgtcagct
ctgcgctttagtgtattaccaagtgaggatgaagcgcttaacaaaagcgccgcgcaagcg
cggctaagccaagcattcgctggtcgagttgcagcgcttatcgagcaagggcggtcgggg
gttgcgaagattggcgaaaacccagttgtgccagcggatatctgtgtgttagttcgcgac
cgcatagaagcgagcttgataaaacgagccttaaatcaactcgatattgccagtgtgtac
cttgccagagatagtgtatttaggcagccgctagcaatcgcgttgtatcaactgcttgat
gtactgcacgggagttacgacgaagcggcgctcagaggcgtgcttgcgggaccattattt
tatttaaacaaccaagcactgtacgacttgcagtttaatgaacagcagtggcaaggttat
ttgcagctatttagtgagttaacacagctgtggtatcgctctggtgcaatggcgatgctg
gaacacttattgataacttgtgagctgccagtgatttggcagcagcagggaatggaagtg
gagcgttggcttactgacttccgtcatttggctgagcttttacagcataagcaattagag
cttgatggcacgggtcgtgtgttacgttggtttttatcgcagctaaataatgctcagagt
ggcagcagccaaattcgcttagagagcgatgccaatttggtgaaaattgtgaccatgcac
gcatcaaaaggtttggagtatccgattgtctttatgccatttgcacttgggtttcgtgag
cctgatacgttagtttatcaccaaggggataagttagttgtcgaccttgaagccagtgat
gacgcgaaagaaaaagcagagcaagaacgactggctgaggatattcgcttactttacgtt
gcgctgacgcgagcggtgcattattgcgagcttgggctttacgacattcaacaagggcgt
agtaaaaagtctgcactgcacaaaacggccttaggatttgccttgtttggcacggaaact
ttcgacagtgccgaggcttggcaaagtgccttaagccagttatgtaaagcacatgcggca
atggaatgtgtaagattagatgaaatcaccacgccacagcaagcgataaacaccagactt
gaagacaagcctttagctctgtctgcgaaaaccttcagcggtcaggttgaacgacattgg
cgtaccacaagctttagccagctaagctaccacacgcatcatggtgataaaccaaccggg
gccgtggacgaaaaccatttactggacttgcctgagcagcgccaagagcgggaaaaaacc
tcttatacttttcctaagggggccaagccgggcagctgtttgcacgaaatctttgagctt
atagattttaccgcgccgcattcccccaaaaacgaagataagtataccctgaccgaagcg
atcactaaatctttggataagttcggtatcgcgactgaatggcaagagacagctgagcgt
tggataacaagctgcttggctgcatctcttgcgccacatcctcatttacaacttggtgtg
ctgccaccggacgactgcattgttgaaatggagttttacttgccactaaaaccactcagt
gcggtgaagctgaacaagatcctcagtgacattactggacaaaagtcgtttttaaacttt
gatgatgtgacaggcatgttgaaagggtttattgatttaatcttcaagtggcaaggacag
ttttttgttctcgattacaagtccaactaccttggcgatagcccagaagattatcactac
gataacctcaatgctgcgatgtcgtctcatcagtatcatttacagtatatgatttatacc
gtggcacttcaccgcttgttaaagcagcgcctcgtggactataaccctgagcagcattta
ggtggaaactactatttgttcttacgtgcattaccggacaatcaggggattttcttcaat
cagttaagcgtaaagcaggtattagaattagatgcattatttgaggagtctgtatga
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integrated database retrieval system