Pseudoalteromonas piratica: OM33_03765
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Entry
OM33_03765 CDS
T03513
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pseo
Pseudoalteromonas piratica
Pathway
pseo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OM33_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseo03021
]
OM33_03765
03400 DNA repair and recombination proteins [BR:
pseo03400
]
OM33_03765
Enzymes [BR:
pseo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OM33_03765
Transcription machinery [BR:
pseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OM33_03765
DNA repair and recombination proteins [BR:
pseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OM33_03765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AIY64366
UniProt:
A0A0A7EE75
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All DBs
Position
1:835669..836655
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AA seq
328 aa
AA seq
DB search
MQGSVTEFLKPKLVDIDAVSTSRSKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSAKEGVQEDIIEILLNLKGLAVSLHEKDEVFLTLTKSGVGPVTAADIQHDDS
VEVANPDHVICHLTTDSSEISMRIRVQRGRGYVPASSRISSEDDERPIGRLLLDASFSPV
ERIAYSVESARVEQRTDLDKLIIDMETNGTIDPEEAIRRASTILAEQLDAFVDLRDVAEP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEQIQYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASLAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttaccgaattcctaaagccaaaattagtcgatatcgacgctgtaagt
acatcgcgttctaaagtaattttagagcctctagagcgtggctttggtcacactttaggt
aatgcacttcgtcgtattttactttcatcaatgccaggttgtgcagtgactgaagttgaa
atcgacggcgtactacacgaatacagtgcgaaggaaggtgttcaagaagacatcatcgaa
attctactaaaccttaaaggcttagcagtttctttacacgagaaagatgaagtatttcta
accctgactaaatcaggcgttggccctgtaaccgctgctgacattcaacacgatgacagt
gttgaagttgctaacccagatcacgtgatttgtcacctgacgactgatagcagtgaaatc
agcatgcgtattcgcgttcaacgtggccgtggctacgttccagcgtcgagccgtatttcc
tctgaagacgatgagcgcccaatcggtcgtttgttgctagatgcttcatttagcccggtt
gagcgtattgcgtactcggttgaatcagcacgtgttgagcaacgtacagacttagataag
ctaattatcgacatggaaacaaatggtacgattgatcctgaagaggcaatccgtcgtgca
tctactattctagctgagcagttagacgcattcgtagatttacgtgatgtggctgagcca
gaagagaaagaagagaagccggaatttgatccgattctacttcgtcctgttgatgattta
gagcttactgtacgttctgcgaactgtctgaaagccgagcaaattcaatatatcggtgat
cttgttcagcgtactgaagttgagcttcttaaaacaccaaaccttggtaagaagtcactt
acagaaattaaagacgtgcttgcttcacgtggtctatctctaggtatgcgcctagaaaac
tggccacctgcaagcttagctgaataa
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