Pseudonocardia sp. EC080610-09: AD006_00750
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Entry
AD006_00750 CDS
T04146
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03420
Nucleotide excision repair
pseq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AD006_00750
03430 Mismatch repair
AD006_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_00750
Enzymes [BR:
pseq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AD006_00750
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AD006_00750
MMR (mismatch excision repair)
Other MMR factors
AD006_00750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALL74213
LinkDB
All DBs
Position
complement(158016..161399)
Genome browser
AA seq
1127 aa
AA seq
DB search
MDPTPVELATALGLHPPTAEQAAVIAAPAGPALVVAGAGAGKTETMAARVVWLVATGRVL
PEQVLGLTFTRKAAQQLGTRVRSRLRRLAGSRMLDDLDPTGARRAALLAGEPTVSTYHAY
AGRLVGEHALRLPAEPANRLLGPTATWQLAHRVVSTWAADLEIDRVPATVTGYLLSLAGE
LGEHLVEPADVERLTARMLPVLEHAPPGKRQRAEPSAGYKARIAGQRMRLELLPLIEEFA
RRKQAEQAMDFSDQMALAARIAEADPEVGRIERGQYRAVLLDEYQDTGHAQRVLLRALFG
VPPGLAPEPEEPEHRSVTAVGDPCQSIYGWRGASAGNLARFRTDFPTPSGGPAPVHGLLT
SFRNPAEVLALANRVSEPLRTAPGAVRVGELRPLDGAGPGDVRAALLPDVAAEIAWAADG
IASRWHAGADEGEPPTAAVLVRRRSDMDALAAALRDRRVPVEVVGLGGLLSTPEVRDLVS
ALRVVTDPLAGPSAVRLLTGPRWRLGIADLAALWQRARELVPSRPARPGPLGPEELALGA
LPGDEAEQAGLADALDDPGEPDRYSQAGFDRIRRIGRELSHLRARAAAPLTDLVADVERT
LLLDVETMARPGPTGRAHLDAFADVVADFAAGADVPSLPALLDYLDTAEQAEEGLTPGEV
EVSPDRVQILTVHAAKGLEWEIVAVPHLVAQVFPGRKMSGSWLKDPSDLPVPLRGDADDL
PGLDLPPPGADRKQVEQALDDHDDALDERRLAEERRLFYVALTRAERTLLVSGHRWPATG
ERPKDPSVFLTELAEILEGPGGSEVGALEVWAPPPEADTGNPALGVERTAQWPPDPFGDR
ADDVRAGADLVRAELRARAPRRPRRSRRSSTDQLALELPEPGPAEPAPDVPDAEGDPEGW
AADVDVLLAERAAAKERPTVALPGRLSVSRLIELADDPDALAVRLRRPVPLPPNPHARRG
TAFHAWLEQRFGAERLLDIDELPGAADESVTSESVTSESDAAELAELQAAFEASEWADRK
PVDVEVSFETVLAGVAVRGRMDAVFADPDGGWTVVDWKTGGPAAPEREHAVAVQLAAYRL
AWAALQEVPAERVRAAFHYVRDGVTLRPADLLDADGLRALVAGVPAG
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaccccggtcgagctcgccacggcgctcggcctgcacccgccgaccgcggag
caggccgcggtgatcgccgccccggccgggccggcactcgtcgtcgccggggcgggcgcc
ggcaagacggagacgatggcggcccgggtggtctggctcgtcgcgaccggacgggtgctg
cccgagcaggtcctcggcctcaccttcacccgcaaggcggcccagcagctcggcacccgc
gtccggtcccggctccgccggctcgccgggtcccgcatgctcgacgacctcgaccccacc
ggcgcccgcagggccgcgctgctcgcgggcgagcccaccgtctccacctaccacgcctac
gccgggcggctggtcggcgagcacgcgctgcggctgcccgccgagccggcgaaccggctg
ctcggcccgaccgcgacctggcagctcgcgcaccgggtcgtctccacctgggcggccgac
ctggagatcgaccgggtcccggcgaccgtgaccgggtacctgctctcgctggccggtgag
ctgggggagcacctcgtcgaaccggccgacgtcgagcggctcaccgcccggatgctgccg
gtgctggagcacgccccgccgggcaagcggcagcgcgcggagccgtcggcggggtacaag
gcccggatcgccgggcagcggatgcggctggagctgctgccgctgatcgaggagttcgcc
cgccgcaagcaggccgaacaggcgatggacttctccgaccagatggcgctcgccgcgcgc
atcgccgaggccgacccggaggtcgggcggatcgagcgcggtcagtaccgggccgtgctg
ctcgacgagtaccaggacaccgggcacgcccagcgggtgctgctgcgggcgctgttcggt
gtcccgccgggactcgccccggagccggaggagcccgagcaccggtcggtgaccgccgtc
ggtgacccctgccagtcgatctacggctggcgcggcgcgagcgccgggaacctggcccgg
ttccgcaccgacttcccgacgccgtccggtggccctgctcccgtgcacgggctgctcacc
agcttccgcaatccggccgaggtgctcgcgctcgcgaaccgggtgtccgagccgctgcgc
accgcgcccggcgccgtccgcgtcggtgagctccgcccgctcgacggcgccggtcccggc
gacgtccgggccgcgttgttgcccgacgtcgccgccgagatcgcctgggcggccgacggc
atcgcgtcccgctggcacgccggcgccgacgagggcgagccgcccaccgccgcggtgctg
gtccgccgccgctccgacatggacgcgctcgccgccgcgctgcgcgaccgtcgggtcccg
gtcgaggtcgtcgggctcggcgggttgctgtcgacccccgaggtccgtgacctggtgtca
gcgctgcgggtggtgaccgacccgctggccgggccctcggcggtacggctgctgaccggg
ccccgctggcggctcggcatcgccgacctcgccgcgctgtggcagcgggcccgcgagctc
gtcccgtcccggccggcccgccccggcccgctcggacccgaggagctggccctgggggcg
ctccccggtgacgaggccgagcaggccgggctcgccgacgccctcgacgacccgggcgag
ccggaccgctactcccaggccgggttcgaccggatccgccggatcggccgcgagctgtcc
cacctgcgggcccgcgccgcggccccgctgaccgacctcgtcgccgacgtcgagcggacc
ctgctgctcgacgtcgagacgatggcccgccccggcccgaccggccgggcacacctggac
gcgttcgccgacgtcgtcgccgacttcgccgccggtgccgacgtgccgtcgctgcccgcg
ctgctcgactacctcgacacggcggagcaggccgaggagggcctgaccccgggtgaggtc
gaggtctccccggaccgggtgcagatcctcaccgtgcacgcggcgaaggggctggagtgg
gagatcgtcgccgtcccgcacctggtggcgcaggtcttcccgggccgcaagatgtccggc
agctggctgaaggacccgtccgacctgccggtcccgctgcgcggcgacgccgacgacctc
cccggtctcgacctcccgccgcccggcgcggaccgcaagcaggtcgagcaggccctcgac
gaccacgacgacgccctcgacgagcgccgcctcgccgaggagcgccggctgttctacgtc
gcgctcacccgtgccgagcgcaccctgctcgtctccgggcaccggtggccggcgaccggg
gagcgcccgaaggacccgtcggtgttcctcaccgagctcgccgagatcctggaggggccc
ggtggctccgaggtcggcgcgctggaggtgtgggcgccgccgccggaggccgacaccggg
aacccggcgctcggcgtggagcgcaccgcgcagtggccgccggacccgttcggcgaccgg
gcggacgacgtgcgggccggtgccgacctggtccgggcggagttgcgggcccgggcaccg
cgacggccgcggcggtcccggcggtcgtccaccgaccagctcgcgctggagctgcccgag
cccggcccggcggaaccggccccggacgtacccgacgcggagggtgacccggagggctgg
gccgccgacgtcgacgtcctgctcgccgagcgggccgccgccaaggagcgccccaccgtc
gcgctgccggggcggctgtcggtgagccggctgatcgagctcgccgacgatccggacgcg
ctcgccgtgcggctgcgccgcccggtgccgctgccgccgaacccgcacgcgcgacgcggg
accgcgttccacgcctggctggagcagcggttcggtgcggaacggctgctcgacatcgac
gagctgcccggcgccgccgacgagtccgtcacctcggagtccgtcacctcggagtccgac
gccgcggagctggcggagctgcaggccgcgttcgaggcgtcggagtgggcggaccgcaag
ccggtcgacgtcgaggtgtcgttcgagaccgtcctcgccggggtcgccgtgcgtgggcgg
atggacgccgtcttcgccgatcccgacggcggctggaccgtcgtcgactggaagaccggt
gggccggccgccccggagcgggagcacgccgtcgcggtgcagctggcggcgtaccggctg
gcctgggcggcgctgcaggaggtcccggccgagcgggtgcgggccgcgttccactacgtc
cgcgacggcgtcaccctgcggccggcggacctgctggacgccgacgggctgcgggcgctg
gtggcgggtgtgccggcgggctga
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