Pseudonocardia sp. EC080610-09: AD006_09540
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Entry
AD006_09540 CDS
T04146
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AD006_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseq03021
]
AD006_09540
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_09540
Enzymes [BR:
pseq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AD006_09540
Transcription machinery [BR:
pseq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AD006_09540
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AD006_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALL75492
LinkDB
All DBs
Position
1984555..1985607
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPSLTEDVVTETRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDLHIASLNDKGRLEVELVVERGRGYVPAMQNKATGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVLDVESKPSITPRDALASSGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAFAMPIEELDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGAKSIDEVKMK
LVGLGLALKDSPPGFDPSAAAAEYGVDGGSGFDPDTFGDDGQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgaccctctctcaccgaggacgtcgtcaccgagacccggtcgcgg
ttcgtcatcgagccgctcgagccgggcttcggctacaccctcgggaactccctgcgccgg
acgctgctctcgtccatccccggtgccgccgtcacgtccatccggatcgacggcgtcctg
cacgagttcaccaccgtgccgggggtcaaggaggatgtcaccgacatcatcctgaacctc
aaggagctcgtcgtgagctccgaggaggacgagccggtgaccatgtacctgcgcaagcag
ggcccgggcgcggtcaccgcgggcgacatcgtgccgcccgccggtgtcaccgtgcacaac
ccggacctgcacatcgcctcgctgaacgacaagggccggctcgaggtcgagctcgtcgtc
gagcggggtcgcgggtacgtcccggcgatgcagaacaaggcgaccggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acgcgagtcgagcagcgcaccgacttcgacaagctggtgctcgacgtcgagtcgaagccg
tccatcaccccgcgggacgcgctggcgtcgtccggcaagaccctggtcgagctgttcggc
ctggcccgcgagctgaacgtggacgccgagggcatcgagatcggcccctccccgcaggag
gcggacaccatcgcggcgttcgcgatgccgatcgaggagctggacctcacggtccggtcc
tacaactgcctcaagcgcgagggcatccacacggtcggcgagctggtcggccgcagcgag
gcggacctgctcgacatccgcaacttcggcgccaagtcgatcgacgaggtcaagatgaag
ctcgtcggtctcggcctggccctcaaggacagcccgcccgggttcgacccgtcggcggcg
gcggccgagtacggcgtcgacggtggcagcgggttcgacccggacaccttcggtgacgac
ggtcaggactacgcagaaacggagcagttgtag
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