Pseudonocardia sp. EC080610-09: AD006_15860
Help
Entry
AD006_15860 CDS
T04146
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AD006_15860
Enzymes [BR:
pseq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AD006_15860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALL76414
LinkDB
All DBs
Position
complement(3307109..3309646)
Genome browser
AA seq
845 aa
AA seq
DB search
MASPLPDLPVTAVLDELVRTLDDRGAGVLVAPPGTGKTTLVPLALAGLTGSGPAPPGRVV
VAEPRRVAARAAAARMSSLLGTEVGGPVGYRVRGDARSGPDTRVEVVTSGLLLRRLAADP
ELAGVSAVVLDEVHERHLDADLLLTLLLDARDGLRPDLRLLATSATLAAARPAALLGDGD
RPAPVLEVAARTFDVDVTHVPPVRDERTEATVVRAVRRARVHGSVLAFLPGVAEIDRVAS
ALRGLDDLDADVLPLHGRLPAAEQDAALREGPRARVVLATAVAESSLTVPGVRAVVDSGL
ARVPHTDHRRGLSGLVTRRVSRAVAVQRAGRAGREAPGHAYRCWPEGEVLADAPDPEIRI
ADLTALALDLAVWGTPDGAGLRWWDAPPPGPLAAGRDVLTALGALDAAGSVTARGRRIAA
QGLHPRLARALLDGAAAGIDPREVAGIVAVLDDDTLAGREADLATALSRLRSGDAPGARR
WRGERDRLARSLHRTGRDGSGDGDAGTGGNRRRPAADHGDPVALVTGFAHPERLARRREA
GSGVYLMAGGTAAEVPSGPLRDAEWLAVAVADRRPGQVHGRVRLAAATDRETAERAGTAL
LVDGAEVVWESGDVRARTVRRLGAIVLEERPDPRPDAGAVRAALVAGLRAEGTGLLRWGA
AARSLAERLGFLHRTLGEPWPDVAEDALLDSAADPAGWLAGPLATARRRADLARVDAGQA
LRAYAAGRVGGLAGRIDELAPERLLVPSGSRIALDYSGEAPALPVKVQEVFGWTGSPAVA
GGRVPVVLHLLSPAGRPAAVTADLSSFWATGYPQVRAELRGRYPKHAWPEDPLTAPPGRG
TGRRR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccgctgcccgacctgcccgtcaccgccgtcctcgacgagctggtccgcacc
ctcgacgaccgcggggcgggtgtgctggtcgcgccgcccggcaccggcaagacgacgctg
gtcccgctcgcgctggccgggctgaccggatccggcccggcaccgccgggccgggtcgtg
gtcgccgaaccgcgccgggtggcggcccgcgccgcggccgcccgcatgtcgtcgctgctc
gggaccgaggtcggcgggccggtcggctaccgcgtccgcggcgacgcccggtccgggccc
gacacgagggtcgaggtcgtgacctcggggctgctgctgcgccgcctcgccgccgacccg
gagctggcgggggtgtcggcggtggtgctggacgaggtgcacgagcggcacctcgacgcc
gacctcctgctcaccctgctgctcgacgcccgcgacgggctgcgcccggacctgcggctg
ctcgccacctcggccaccctcgccgccgcccgccccgccgcactgctcggcgacggcgac
cggccggccccggtgctggaggtcgcggcgcgcacgttcgacgtcgacgtcacccatgtc
ccaccggtccgcgacgagcggaccgaggccaccgtcgtccgtgcggtgcggcgggcgcgc
gtgcacgggtcggtgctcgcgttcctgcccggggtcgccgagatcgaccgggtcgcctcg
gcactgcgcgggctggacgacctcgacgccgacgtcctcccgctgcacgggcggctgccc
gcggccgagcaggacgcggcgctgcgggagggcccgcgggcccgggtcgtcctggccacc
gccgtcgccgagtcgagcctgaccgtgccgggggtgcgcgccgtcgtcgactcggggctg
gcgcgggtgccgcacaccgaccaccggcgcgggctgtccgggctggtcacccggcgggtg
tcacgggcggtcgcggtccagcgggcagggcgcgccgggcgggaggctcccgggcacgcc
taccgctgctggcccgagggcgaggtgctcgccgacgcccccgatccggagatccggatc
gcggacctcaccgcgctcgcgctggacctcgccgtctggggcaccccggacggggccggc
ctgcggtggtgggacgcgccgccgccgggcccgctcgccgccggccgggacgtgctgacc
gcgctcggggctctcgacgccgccgggtcggtcaccgcccggggccgccggatcgcggca
cagggcctgcacccgcggctggcccgcgcgctgctcgacggtgcggcagccgggatcgac
ccgcgcgaggtggcgggcatcgtcgcggtgctcgacgacgacaccctcgccgggcgggaa
gccgacctggccacggccctctcccggttgcggtccggggacgctccgggtgcccggcgc
tggcgcggcgagcgggaccggctggcccggtccctgcaccgcacggggcgcgacggctcc
ggtgacggtgacgcgggcaccggcgggaaccgccggcggcccgctgcggaccacggggac
ccggtcgcgctggtgaccgggttcgcccatcccgagcgtctcgcccgccgccgggaggcc
gggtccggggtgtacctgatggccggtggcaccgcggccgaggtgccgtccggtccgctg
cgcgacgcggagtggctcgccgtcgccgtcgcggaccggcgcccggggcaggtgcacggt
cgcgtccggctggccgcggcgaccgaccgcgagaccgccgaacgggccgggaccgcgctg
ctcgtcgacggggcggaggtggtgtgggagtcgggcgacgtccgggccaggacggtccgt
cggctcggcgcgatcgtgctggaggagcgcccggacccgcggccggacgccggcgcggtg
cgcgcggcgctggtcgcgggcctgcgcgccgagggcaccggactgctgcgctggggggcg
gccgcgcggtcgctggccgaacggctcggcttcctgcaccgcaccctgggcgagccctgg
ccggacgtcgccgaggacgcgctgctcgactccgccgccgatcccgccggctggctcgcg
ggcccgctcgcgaccgcgcggcggcgcgccgacctggccagggtcgacgccgggcaggcg
ttgcgggcgtacgcggccggccgggtgggtgggctcgccggacgcatcgacgagctcgcc
ccggaacgcctcctcgtgccgtccgggtcccggatcgcgctcgactactcgggcgaggcg
cccgcgctgccggtgaaggtgcaggaggtcttcggctggaccggctcccccgccgtcgcg
ggcggacgggtgccggtggtgctgcacctgctctcccccgccgggcgcccggcggcggtg
acggcggacctgtcgtcgttctgggcgaccgggtacccgcaggtcagggccgagctgcgc
ggccgctacccgaagcacgcctggccggaggacccgctcacggcgccgcccggccggggc
accgggcggcgtcgctga
DBGET
integrated database retrieval system
