Pseudomonas sp. StFLB209: PSCI_5139
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Entry
PSCI_5139 CDS
T03623
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pses03000
]
PSCI_5139
Transcription factors [BR:
pses03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSCI_5139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
PAS_8
Mg_chelatase
PAS
PAS_4
PAS_7
AAA_16
HTH_50
MCM
ATPase
PAS_10
NTF-like
SH3_2
Motif
Other DBs
NCBI-ProteinID:
BAP45841
UniProt:
A0A077LND2
LinkDB
All DBs
Position
complement(5808244..5810268)
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AA seq
674 aa
AA seq
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MRDFADRVEPLAQLLAPQDLDYLTALNPGDLSDGPIPALQAAWQACQAGISSPPEQVRAL
IWASWQRSLASGIDPHDSAYRFVSSQMLAATLHEHRELIHTAAQVMQGLLAYNPRGHINL
TDSHGTTLHFCGLDITPIGSRLLESVQGTNCTGLALREDRLVYVLAEENFASGLRARRMH
CAAAPIRDSEGRTRAILTLTAEPGWFHLHTLGTVQAAAEAVSRQMALQALLSEQRAVLEV
LNEGLVVLDSQGRIKTLNRYARQLFNADETSLGAPLRQLAHSEPAQEVLLRDGDGLRDLD
CSFQLADGSALACLVSVCPLAQGGWILSLRENLRIREITRRVIGARAKYTFDNIQGRSRA
LQDALRLARIASRSDSTTLIIGESGTGKELFAQAIHNASARSGGPFVAVNCGAIPRELVQ
SELFGHVEGAFTGATRGGSAGKFELADGGTIFLDEIGDMAFDAQVSLLRVLQEGEVTRVG
AKKSQRVDVRIIAATHRNLSQAVAQGAFREDLYYRLDVLNLSVPPLRLRRDDIALLARHF
LVRVARSLRKDVRDLSADTLRLLEAYGWPGNVRELENTLERATNLATTTQIEVEDLPIEL
QQGPAIGGGRVEARPAARSAGSLDLQSRQAAAIIEVLQATGGNMRLAAQQLGVSRGGLYN
KMHRLGLEVDSFRV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgattttgctgaccgggttgagcctttggcgcaactgcttgcccctcaggatctg
gattatctgaccgccttgaatccaggcgatctgagtgacgggcccataccggcgttgcaa
gcggcctggcaagcctgtcaggcgggcatttcgtcgcctcctgagcaggtgagggcgctg
atctgggcctcttggcaacgcagtctggcaagcggtatcgacccgcatgacagtgcctat
cggtttgtcagttcacagatgttggcggccactttgcacgagcaccgtgaattgattcac
accgcggctcaggtgatgcaggggttgttggcgtacaacccgcgggggcatatcaacctt
accgattcccatggcaccaccctgcatttctgtggcctggacatcacgccgatcgggagc
cgtttgctggagtcggtgcagggcaccaattgcacgggcctggctttgcgtgaagatcgt
ctggtatacgtgctggccgaagaaaacttcgccagtggtctacgtgcgcggcgcatgcat
tgcgcggcagcgccgattcgcgacagtgaaggccgcacccgggctattttgacccttact
gccgagccgggctggtttcatttacacaccctgggcacggtgcaggcggccgccgaagct
gtttcacggcagatggccttgcaagcactgctcagtgaacagcgcgccgtgctggaagtg
ctcaacgaggggctggtggtgcttgattcacaaggccggatcaagacgttgaaccgctat
gcgcggcaattgttcaacgcagatgaaacctcgctcggcgcgccgctgcgccagttggcc
cacagtgaacccgctcaggaggtgctgctgcgtgacggtgacggcttgcgcgacctcgat
tgcagtttccagttggccgatggcagcgccctggcctgcctggtgtcggtctgcccgttg
gcccaaggcggctggattctatcgttgcgcgagaacctgcgcattcgtgagatcacccgc
cgcgtgattggtgcccgtgccaagtataccttcgacaacatacagggccggtcgcgggcg
ctacaggacgccctgcgccttgcacggattgccagtcgcagcgactccaccaccttgatt
atcggcgaaagcggtacaggcaaagagctgttcgcccaggctatccacaatgccagtgcc
cgtagcggcggtcctttcgtggcagtgaactgcggcgcaattccccgtgaactggtgcag
agtgagttgttcgggcatgtcgaaggtgcctttaccggcgccacacggggcggttctgcg
ggcaaattcgagctggccgacggcggcacgatctttctcgatgaaatcggcgacatggcc
tttgatgcccaggtcagcttgctgcgggtgttgcaagaaggcgaggtgacgcgggtcggg
gccaagaaatcccaacgtgtggatgtgcgtattatcgctgccacgcatcgaaaccttagc
caggcggtggcgcagggagcgttccgggaagacctttactaccggctcgacgtgctaaat
ctgagcgtgccgccgttacgactgcgccgtgatgatattgctctgctggcccggcatttt
ctggtcagggtggcgcggtcactgcgcaaggatgtccgcgacctctcggcagataccttg
cgtctgctggaagcttatggctggccggggaatgtgcgcgaactggaaaataccctggag
cgggccaccaacctggcgaccacgacgcagatcgaggtcgaagatttgccgatcgaactg
cagcaaggccctgccattgggggtggtcgcgtcgaagcccgtcctgctgccagaagcgcc
gggtcgctggacctacagagccggcaggccgcagcgatcatcgaggtgctacaggctacg
ggcggtaacatgcgattggcagcgcagcaactgggggtatcacggggcgggttgtataac
aaaatgcatcggctggggcttgaagtggacagctttagagtctga
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