Pseudomonas sp. TCU-HL1: THL1_1641
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Entry
THL1_1641 CDS
T05373
Name
(GenBank) beta-agarase
Organism
pset
Pseudomonas sp. TCU-HL1
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Gene cluster
GFIT
Motif
Pfam:
Agarase_CBM
Glyco_hydro_42
CIA30
Motif
Other DBs
NCBI-ProteinID:
AOE84189
UniProt:
A0A1B3E3S7
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Position
1756872..1759163
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AA seq
763 aa
AA seq
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MLSTPKRPLVLAILLGMSGIPLAAQAETLFNFVRPLDAVQVVTQDANLPSVTAESTANGE
ILRRLTFNAAEKPSLRLTPQSGSWDWSKAEAMSLRIQSAQDWAITLDVAIESTDGKVLTT
QVALPAGPAQTVLIPLAATSPNVHGMRAAPPVPWTRDGKRWLPATLVNGELDRSKVASVT
LSLNQPSAAQNVLLGRFGTEQDDQQEALYDGLMDAYGQYARADWPGKVKNDAQLKRGAED
EAKQVAGWMAKLPQQDTYGGWLGGETFEASGFFRTEKRNGRWFLVTPEGHPFFSLGVNAV
TPGLSQTYVEGREAMFKALPKDNEPLATHFGKGDDRADTDANQGRAFNQGRWYDFYGANI
ERTYGSNDPQRWVSHSLDRLKAWGFNTVGNWSDAAFNSSQRMPYTLPLSIHGDYATIKTG
FDWWGGMPDPFDPRFAMAAERAIAIAARDHRDDPWLLGFFADNELAWGGHGEDPKARYAL
AYGTLRLTTDVPAKRAFLKQLRDKYRNQQGLSKAWGIELQAWELMEDPGFEPPQPSPEYP
AIEEDFKRFQRFYADTYFKTIADSMKWHAPNHMLLGGRFAATVPEAIESCAQYCDVISFN
RYTREPQHGLDMDLLRRLDKPLMITEYHFGSRDRGPFWGGVSEVYKEEERGPAYANFVKK
AAEEPLIVGAHWFQYLDQPATGRLLDGENGHLGLVGITDRPWQGFVDAVRKANLSLAADI
NKPQESGAPAKPQPKEAGKPAAQPEEGEADQPAAVQQEETGKP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgacacccaaacgccccctcgtcctggccatcctcctcgggatgtcgggaatc
cccctggctgcgcaggcagagaccctgttcaacttcgtccgcccgctggacgccgtgcag
gtggtgacccaggacgccaacctgccgagcgtgaccgccgaatccaccgccaatggcgaa
atccttcgccggctcaccttcaatgccgccgagaagcccagcctgcgcctgaccccgcag
tcgggaagctgggactggtccaaggccgaggccatgagcctgcgcatccagagcgcgcag
gattgggccattaccctggatgtcgccatcgaaagcaccgacggcaaggtcctgaccacg
caagtggcgctgccggccggtccggcccagacagtgctgattcccctggctgcaacatcg
cccaacgtccacggcatgcgtgcagcgccgcctgtgccctggacccgtgacggcaagcgc
tggctgccggccacgctggtgaacggcgaactggatcgcagcaaggtcgcctccgtgacc
ctttcgctgaaccagccgagcgcggcccagaacgtgctgctcggtcgcttcggcactgaa
caggatgatcagcaggaggcgctttacgacggcctgatggacgcttacggccagtacgcc
cgtgctgactggccgggcaaggtgaagaacgacgcgcaactgaaaaggggcgccgaggat
gaggcgaagcaagtcgccggctggatggccaagttgccgcagcaggacacctatggtggc
tggctgggcggcgagaccttcgaggccagtggcttcttccgcaccgagaaacgcaacggc
cgctggttcctcgtgacccccgagggccatccattcttctctttgggcgtcaacgcggtg
acacccggcctgagccagacctacgtcgaaggccgcgaggcgatgttcaaggccctgccc
aaggacaacgagcccctggctactcacttcggcaagggcgacgaccgtgccgacacggat
gccaaccagggtcgcgcattcaaccagggccgctggtacgacttctacggcgccaacatc
gagcgcacctacggtagtaacgatccgcagcgctgggtcagccacagcctggatcgcctg
aaagcctggggcttcaataccgtcggcaactggagcgatgcggccttcaattccagccag
cgcatgccctataccttgccgctgtccattcatggtgactacgccaccatcaagaccggc
ttcgactggtggggcggcatgcccgaccccttcgacccacgcttcgccatggcggcggaa
agggctatcgccattgctgcccgcgaccaccgtgacgacccctggctactcggcttcttc
gccgataacgaactcgcctggggtggccatggcgaggacccgaaagcccgctatgcgctg
gcctacggcaccctgcgcctgaccaccgatgtgccggccaagcgcgccttcctcaagcag
ttgcgcgacaagtaccgcaaccagcaagggctctccaaggcctggggcattgagttgcag
gcctgggaactgatggaagaccccggcttcgaaccgccgcagccgagccccgaatacccg
gccatcgaggaagacttcaaacgcttccagcgcttctatgccgacacctatttcaagacc
attgccgactcgatgaagtggcatgcgcccaaccacatgctgctgggggggcgcttcgcc
gccaccgtgccagaggccattgagtcctgcgcgcagtactgcgacgtgatcagcttcaac
cgttatacccgcgagccgcagcatgggctggacatggacctgctgcgccgcctggacaag
ccgttgatgattaccgagtaccacttcggctctcgtgatcgcggcccgttctggggtggc
gtgtcggaggtgtacaaggaggaagagcgtggtccggcctacgccaacttcgtgaaaaag
gctgccgaggaaccgctgatcgtcggcgctcactggttccagtacctcgaccagcctgcc
actggccgcctgctcgacggcgagaacggtcatctggggctggtgggcatcaccgaccgc
ccatggcaaggcttcgtcgacgcggtgcgcaaggcaaacctgagcctggcggcggacatc
aacaagccgcaggagtccggggcgccggctaagcctcagcccaaggaagccggcaagcca
gcggctcagcccgaggagggggaagccgaccagcctgccgctgtgcagcaggaggaaacc
gggaagccctga
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