KEGG   Pseudomonas sp. TCU-HL1: THL1_5217
Entry
THL1_5217         CDS       T05373                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pset  Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:pset00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pset03019]
    THL1_5217
   03009 Ribosome biogenesis [BR:pset03009]
    THL1_5217
Messenger RNA biogenesis [BR:pset03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     THL1_5217
Ribosome biogenesis [BR:pset03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    THL1_5217
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AOE87764
UniProt: A0A1B3EE46
LinkDB
Position
complement(5645173..5645715)
AA seq 180 aa
MQNALNLIWIDLEMTGLNPDTDVIIEMATIVTDSELNVLAEGPTIAIHQSDEVLAGMDEW
NTRQHGQSGLTQRVRESRISAAEAEAQTLAFLDQWVPKGKSPICGNSICQDRRFLYRHMP
QLEAYFHYRNLDVSTVKELAARWSPTVRDGVKKSSSHLALDDIRDSIAELQHYREHFFKI
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcagaatgccctgaacctgatctggatcgatctggaaatgaccggcctgaacccggac
acggacgtcatcatcgagatggctaccatcgtgaccgacagcgagctgaatgtgctcgcc
gaaggcccgaccatcgcgatccaccagagcgacgaagttctcgccggcatggacgagtgg
aacactcgccagcatggccagagcggcctgacccagcgcgtgcgcgaaagccggatcagc
gctgcggaagccgaggcgcagacattggcgttcctcgatcagtgggttcccaagggcaag
tcaccgatctgcggcaacagcatctgccaggatcgacgcttcctctaccgccacatgccg
caactggaagcctacttccactaccgcaacctggacgtatccactgtcaaggagctggct
gcgcgctggtcgcccacggtgcgcgacggggtgaagaagagcagcagccacctggcgctg
gacgacatccgcgattcgattgcggagttgcagcactatcgtgagcacttcttcaagatc
tga

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