Pseudomonas sp. TCU-HL1: THL1_671
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Entry
THL1_671 CDS
T05373
Name
(GenBank) cyclic AMP receptor protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02020
Two-component system
pset02024
Quorum sensing
pset02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THL1_671
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THL1_671
02025 Biofilm formation - Pseudomonas aeruginosa
THL1_671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pset03000
]
THL1_671
Transcription factors [BR:
pset03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
THL1_671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
MarR
HTH_28
MarR_2
HTH_23
HTH_11
MltA
GntR
RPA_C
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AOE83219
UniProt:
A0A1B3E100
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Position
complement(736632..737276)
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AA seq
214 aa
AA seq
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MVAITLTPKIKSLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGRE
MIIAYLNAGDFFGEMGLFDKEGSEKERSAWVRAKTECEVAELSYAKFRELTQQDPEILYA
LGSQMADRLRNTTRKVGDLAFLDVTGRVARTLLDLCKQPDAMTHPDGMQIKITRQEIGRI
VGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcaatcacccttacaccaaaaataaagagcctggacaaactactcgcgcattgt
caccgccgccgttatacggccaagagcaccatcatctacgcgggcgatcgctgcgaaact
ctcttcttcatcatcaagggctccgtcaccatcctgatcgaagatgacgatggccgggaa
atgatcatcgcctacctcaatgccggggacttcttcggcgagatgggcctgttcgacaag
gaaggctccgagaaggaacgtagcgcctgggtccgcgccaagaccgagtgcgaagtggcg
gaactgagctacgccaagttccgcgagctgacccagcaggatcctgaaatcctctacgcc
ctgggtagccagatggccgaccgcctgcgcaacaccacgcgcaaggtgggcgacctggcg
ttcctcgacgtaaccggtcgcgtggcccgcacgctgctggacctgtgcaagcagcccgat
gccatgacccatccggacggcatgcagatcaagatcacccgccaggaaatcggccgcatc
gtcggctgctcccgtgagatggtcggccgcgtactcaagagcctggaagaacaaggccta
gtgcatgtgaagggcaagacgatggtggtcttcggcacccgctga
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