KEGG   Pseudovibrio sp. FO-BEG1: PSE_4269Help
Entry
PSE_4269          CDS       T01669                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
psf  Pseudovibrio sp. FO-BEG1
Pathway
psf00473  D-Alanine metabolism
psf00550  Peptidoglycan biosynthesis
psf01100  Metabolic pathways
psf01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:psf00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    PSE_4269 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PSE_4269 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PSE_4269 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:psf01011]
    PSE_4269 (ddlB)
Enzymes [BR:psf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PSE_4269 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:psf01011]
 Precursor biosynthesis
  Amino acid ligase
   PSE_4269 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID: AEV38773
UniProt: G8PU21
LinkDB All DBs
Position
complement(4621840..4622763)
Genome map
AA seq 307 aa AA seqDB search
MTKHVAVLMGGWVAERPVSLSSGKDCADALEAAGYQVTRVDVDRNISAVLQDLKPDVAFN
ALHGPFGEDGAIQGILEVLDIPYTHSGVMSSALAMHKEKAKAVVKAAGVPVANSLVVSRA
DAARRHVMEPPYVIKPINEGSSFGVLIVKEGQEYPPQELTRDDWEYGELLMVERYIPGRE
LTCAVMGDVALGVLEIVPLGHAYYDYDAKYVPGGSQHILPAEILPSVYQEIQKSSLKAHQ
ALGCRGVTRADFRFNEGPGGLGELICLEVNTQPGMTPTSLLPEIAAHAGHDFQELVSWIV
EDASCGR
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
atgaccaagcatgttgcagttttgatgggtggatgggttgctgagcgccctgtttctctg
tcttcaggcaaagactgtgcggatgcgttggaagctgctggttatcaggtgacccgtgtg
gatgttgaccgcaacatctctgctgttcttcaggacctgaagccggatgtggccttcaat
gcgttgcatggcccgtttggggaagacggggctattcagggtatcctagaggtgctcgat
attccttacacccattccggtgtgatgtcctctgcgcttgccatgcacaaggaaaaggca
aaggccgtggtgaaggcggctggtgtgccggttgctaattccctcgtggtcagccgcgcg
gatgctgcgcgccgtcatgtgatggaaccgccttatgtgattaagccaatcaatgaaggc
tcgtccttcggcgtgttgatcgtgaaggaggggcaggagtacccaccgcaggaattgacc
cgtgacgattgggagtatggtgagttgcttatggtcgagcgctacatcccaggccgcgag
ttgacgtgtgcggtaatgggtgatgtggcgttaggggtactagaaattgtaccgctgggg
cacgcttactacgattatgatgcaaaatacgtcccaggcggttcacaacacatacttcct
gcggaaattttaccatctgtttaccaagaaatacaaaaatcaagtctcaaggcacatcag
gctctggggtgtcgcggcgttacacgcgccgacttccgttttaacgaaggacccggtggc
ctaggagaactgatctgtcttgaggtgaacactcaacccggcatgacgccaacatcactt
ctaccggaaatcgcggcgcacgccggacatgatttccaagagttggtgagttggatcgtg
gaggacgcaagttgcggaagataa

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