Pseudomonas aeruginosa B136-33: G655_01810
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Entry
G655_01810 CDS
T02627
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psg
Pseudomonas aeruginosa B136-33
Pathway
psg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G655_01810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psg03400
]
G655_01810
Enzymes [BR:
psg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G655_01810
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G655_01810
DNA repair and recombination proteins [BR:
psg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G655_01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AGI79287
LinkDB
All DBs
Position
392351..393163
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LLGAEAGTLISHLGMSGSLRLVESGTPASRHEHVDIELASGMALRYTDPRRFGAMLWSLA
PLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRKPAGSISKARYLRLAEEIKRILAIAIERGGTTLRDFVGGDGQPGYFQQELFVYGR
GGEFCKVCGSTLREIRLGQRASVYCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactacccgaagtcgaaaccacccgccggggcatcgccccctacctcgaaggc
cagcgcgtcgagcgcgtgatcgtgcgcgagcggcgcctgcgttggccgatccccgaagac
ctggacgtgcgcctgtccggacaacgcatcgtcagcgtcgagcgccgcgccaagtacctg
ctgctgggcgccgaggccggtacgctgatcagccacctgggcatgtccggcagcctgagg
ctggtggagagcggcaccccggccagtcgccacgagcacgtcgacatcgagctggcctcg
ggcatggccctgcgctacaccgatccgcggcgcttcggcgccatgctctggagcctggcg
ccactggaacacgagctgctgcgcaacctcggcccggaaccgctgaccgacgctttcgcc
ggccagcgtctgttcgagctgtcgcgcgggcggagcatggcggtcaaaccgttcatcatg
gacaacgcggtggtggtcggggtcggcaacatctacgccagcgaagcgctgttcgccgcc
ggcatcgatccgcgcaagcccgccgggagcatctccaaggcgcgctacctgcgcctggcg
gaggagatcaagcggatcctggcgatcgccatcgagcgcggcggcaccaccctgcgcgat
ttcgtcggcggcgacggccagcccggttacttccagcaggaattgttcgtctatggccgt
ggcggggagttctgcaaggtctgcggcagcaccctgcgcgagatccgcctaggccagcgc
gccagcgtgtactgcccgcgctgccaacgctga
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