Pseudomonas aeruginosa B136-33: G655_22035
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Entry
G655_22035 CDS
T02627
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psg
Pseudomonas aeruginosa B136-33
Pathway
psg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G655_22035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psg03400
]
G655_22035
Enzymes [BR:
psg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G655_22035
DNA repair and recombination proteins [BR:
psg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G655_22035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGI83322
LinkDB
All DBs
Position
complement(4843925..4847662)
Genome browser
AA seq
1245 aa
AA seq
DB search
MSQQQMPVALDPLDFPLYGSRLIEASAGTGKTFTIALLYVRLVLDHGGENAFGRPLSPPE
ILVVTFTDAATQELRERIRSRLGEAARCFAEPQERHDGLLVALRQQYPAERWPGCARLLR
LAAEWMDEAAVSTIHSWCYRMLREHAFDSGSLFTQNLETDQSELLAEVVRDYWRRNFYGL
TAPAAQAVASCYSGPEALGKALQPLLARQDADFRYADQALSAPESLAALLEQGGDWYRQL
DQLDAQARAAWRAARVELEALLRDLRPYLNGNSYRGKDSDETFDAWLQALADWSEGGEQP
ANLGKFGQTRIKLTAKRVAPEHAALRAIDAWAAHQEERPDLAPHLLLHALGEVGRELEVE
KQRRAEIGFDDLLSRLDRALQGPGGERLAQLIREQFPVALIDEFQDTDPVQYRIFERIYR
IAADPDEPQARETGLFMIGDPKQAIYAFRGADIHTYLRAREATRGRHYTLGKNFRSTAAM
VAAANRCFAFAEEHPRGAFRFAREGLENPVPFHAVDAQGRAERLLIDGAEAPAMTFWNLD
AEAGVLGSAAYRQEMAERSASAIRRWLSLADLGRAGFADEQGGWRALRPADIAILVRGRA
EAEAIRSGLAARRLASVYLSDRDSVFDSQEAADLLHWLRACADPGADALLRVALATRSLH
LDWATLERLNQDELFWERMVLRFRDYRRSWQAQGVLPMLRRLLADFELPARLLRHADGER
SLTNLLHLAEWLQRAAVELDGEHALIRHLAEQVQSPGSEEILRLESDADLIKVVTIHKSK
GLEYPLVLLPFICSWRELDGNSGAPASFHEDGAAGRVIELARRKEQAARAYEQANDERLG
EDMRLLYVALTRARHSVWLGIAPLVASNSKSPELHKGALGYLLAGGATIGSDGLGQCLAA
LRGECREIVVEPAPEADAERYVAGRGQGLGQARETRRSSREKWWVASYSGLQLQASAGLE
DDEALESDESQEPISAEEATFHEEGRSAEQPPVAHASEMRDDLHRFPRGPAPGTFLHGLL
EWAGREGFDVARADAQRRRELVARRCDLRGWKDWAEPLDLWLEQYLAEPLRWPGGETSLA
GLVAYQVEMEFWFATHQVQAEAIDALVRRHTLGGAARPTLAPTLLNGMFKGFVDLVFEHQ
GRFYVADYKSNWLGADDGAYSPEAMTAAVLENRYDLQYVLYLLALHRQLKARLPDYDYDR
HMGGAVYLFLRGARAATQGLHFERPPRELIERLDALFSGQPGAER
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagcagatgcccgtggccctcgatccgctggatttcccgttgtacggcagc
cgcctgatcgaggccagcgccggtaccggcaagacgttcaccatcgccctgctatacgta
cgcctggtcctcgaccatggcggcgagaacgctttcggccggccgctgagcccgccggaa
atcctcgtggtgaccttcaccgatgcggcgacccaggaactccgcgagcgtatccgcagc
cgcctgggcgaagcggcgcgttgtttcgccgagccgcaggagcgccacgacggcctgctg
gtcgcgttgcgccagcagtatcccgccgagcgctggccgggctgcgcgcgcctgctgcgc
ctggccgcggagtggatggacgaggccgcggtatcgaccatccacagttggtgctaccgg
atgctgcgcgagcacgccttcgacagcggcagcctgttcacccagaacctggaaaccgac
cagagcgaattgctcgccgaagtggtacgggactactggcggcgtaacttctacggcctg
acggctccggcggcgcaagccgtggccagttgctacagcgggccggaggcgctgggcaag
gccttgcagccgctgctggcgcggcaggacgccgacttccgctacgccgaccaggcgctg
agtgcgcccgagtcgctggcagccttgctggagcagggcggcgactggtatcgccagctc
gaccaactggacgcgcaggcccgcgccgcctggcgcgcagcgcgcgtcgaactggaagcg
ctgctgcgcgacctgcgtccctacctgaacggcaacagctatcgcggcaaggacagcgac
gagaccttcgacgcctggctgcaagcgttggcggactggagcgagggcggcgagcagccg
gccaacctcggcaagttcggccagacccggatcaagctcaccgccaagcgcgtggcgccc
gagcatgccgcgctaagggccatcgacgcctgggccgcgcatcaggaagagcgtcccgat
ctcgctccccacctgttgttgcacgcgttgggcgaagtcgggcgcgaactggaggtcgag
aagcagcggcgtgccgagatcggcttcgacgacctgctcagccgcctcgaccgcgccttg
caggggcctggtggcgagcgcctggcgcaattgatccgcgagcagttcccggtggcgctg
atcgacgagttccaggataccgacccggtgcagtaccggatcttcgagcgcatctaccgg
atcgccgccgatcccgacgagccccaggcgcgggaaaccggcctgttcatgatcggcgac
cccaagcaggcgatctacgccttccgcggtgccgacatccatacctacctgcgcgcccgc
gaggccactcgcgggcggcattacacccttggcaagaacttccgctcgactgccgccatg
gtggcggccgccaaccgctgcttcgccttcgccgaagagcacccgcgcggcgccttccgt
ttcgcccgcgaggggctggaaaacccggtgccgttccatgcggtggacgcccaggggcgc
gccgaacgtttgttgatcgacggtgccgaggcgccggcgatgacgttctggaaccttgac
gccgaagccggcgtgctcggctccgcggcgtatcgccaggaaatggccgagcgcagcgcc
agcgccatccgccgctggctgagcctggccgacctgggccgcgccggcttcgccgacgag
cagggcggctggcgggcgttgcgcccggcggatatcgccatcctcgtccgcggtcgcgcc
gaggccgaggcgatccgcagcgggttggcggcgcgacgactggccagcgtctacctgtcc
gaccgcgactcggtgttcgacagccaggaagccgccgacctgctgcactggctgcgcgcc
tgcgccgaccccggtgccgatgcgctgctgcgggtcgccctggctacccgcagcctgcac
ctggactgggcgaccctggaacgattgaaccaggacgaactgttctgggaacggatggtc
ctgcgcttccgcgactatcgccggtcctggcaggcccagggcgtattgccgatgctgcgg
cgcctgctcgccgacttcgaactgccggcgcgcctgctgcggcatgccgatggcgagcgc
agcctgaccaacctgctgcacctggccgagtggctgcagcgcgcggcggtggagctggac
ggcgagcacgcgctgatccgccatctggccgagcaggtgcagagtccggggagcgaagag
atcctccgcctggaaagcgacgccgacctgatcaaggtggtgaccatccacaagtccaag
gggctggaataccccttggtgctgctgcccttcatctgcagctggagggagctggacggc
aacagcggcgcgccggcgagtttccacgaggatggcgctgcagggcgggtcatcgagctg
gcgcggcgcaaggagcaggctgcgcgggcctacgagcaggccaacgacgagcgcctcggc
gaagacatgcgcctgctctacgtggccctgacccgcgcccgccattcggtgtggctgggc
atcgcgccgctggtggcgagcaacagcaagtcgccggagttgcacaagggggccctgggc
tacctgcttgccggcggcgcgaccatcggtagcgatggcctcggccaatgcctcgccgcg
ctgcgcggcgagtgccgggagatcgtcgtcgagccggcccccgaggcggacgccgaacgc
tatgtcgcagggcgcggccagggccttgggcaggcccgcgaaacccgccgcagcagccgc
gagaagtggtgggtcgccagctattccggcctgcaattgcaggcctccgccgggctggag
gatgacgaggcgttggagagcgacgaatcgcaggagccgatcagcgccgaggaagccacc
ttccacgaagaaggccgttccgccgaacagccgccggtcgcgcacgccagcgaaatgcgc
gacgacctgcatcgcttcccgcgcggaccggctcccggcaccttcctccacgggctgctc
gaatgggccggccgcgaaggcttcgatgtggcgcgcgccgatgcccagcggcgccgcgaa
ctggtcgcgcgacgctgcgacctgcggggctggaaggactgggccgaaccgctcgatctg
tggctggaacagtatctcgccgaaccgctgcgctggcccggtggcgaaaccagcctggcc
gggctggtcgcctaccaggtggaaatggagttctggttcgccacccaccaggtccaggcc
gaggcgatcgacgccctggtccggcgccatacccttggcggcgcggcgcgtccgacgctg
gcgccgaccctgctgaacggcatgttcaagggcttcgtcgacctggtcttcgagcaccag
gggcgtttctacgtggccgactacaagtccaactggctgggcgccgacgacggcgcctac
agcccggaagcgatgaccgccgcggtgctggagaaccgttatgacctgcagtacgtgttg
tacctgctggccctgcaccggcagttgaaggcgcgcctgcccgactacgactacgaccgc
cacatgggcggcgccgtgtacctgttccttcgcggcgcccgcgcggcgacccagggcctg
cacttcgagcgcccgccgcgggaactgatcgaacgcctggacgcgctgttcagcggccag
ccgggagccgagcgatga
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