Stutzerimonas stutzeri RCH2: Psest_3576
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Entry
Psest_3576 CDS
T02391
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psest_3576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_3576
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psest_3576
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Psest_3576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
BCA_ABC_TP_C
AAA_16
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
APS_kinase
cobW
Zn-ribbon_8
AAA_21
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGA88065
UniProt:
L0GRR3
LinkDB
All DBs
Position
3750195..3753038
Genome browser
AA seq
947 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDAPLEAQTVSQMVDQVLALPEGRKLMLLAPVIRERKGEHLAVFDELRAQGFVRARVN
GRLYELDELPKLDKQKKHSIDVVVDRFKVRGDLQQRLAESFETALKLADGIALVASMEEE
DESEEMIFSARFACPICGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDAKRLVNGEL
TLAEGAIRGWDRRNVYYFQMLGSLASHYGFSLDEPFDSLAADHQKSILRGSGRESVEFRY
LNDRGDIVKRSHPFEGIIPNLERRYRETESNSVREELAKYLSTQPCPDCRGTRLRREARH
VWVGDRTLPAVTAMPIGDATDYFGGLSLSGRRGEIADKILKEIRERLQFLVNVGLDYLTL
DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLRHLRDIGNT
VIVVEHDEDAIRLADYVVDIGPGAGVHGGRIVAEGTPDEVMAHPDSLTGKYLSGRVKINY
RPERTRRDPKKLLKLKGARGNNLRNVDLEIPVGLLTCITGVSGSGKSTLINNTLFPITAT
ALNGASTLEVAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
ARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKY
KGKSITEVLDMTIEEAREFFDPVPAVARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL
SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW
LVDLGPEGGSKGGQIIACGTPEEVAGMAQSHTGHFLKPLLERDRSAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagattctgattcgtggggcccgcacccacaacctgaagaacatcgacctcacc
ctgccgcgcgacaagctgatcgtcatcactggcctctccggctccggcaagtcctcgctg
gccttcgacacgctgtacgccgaaggccagcgccgttacgtcgaatcgctttcggcctat
gctcggcagttcctctcgatgatggaaaagcccgatgtcgacaccatcgaagggctctcg
ccggcgatctccatcgagcagaaatccacgtcgcacaaccctcgctccaccgtcggcacc
atcaccgagatctacgattacctgcgcctgctctatgcacgagtcggcacgccacgctgt
ccggatcacgatgcgccgctggaagcgcagacggtcagtcagatggtcgatcaggtactg
gcactgccggaaggtcgcaagctgatgctgctggcaccggtcatccgcgaacgcaagggc
gagcatctggccgtgtttgacgaactgcgcgcccagggtttcgtgcgcgcccgcgtcaac
gggcggctgtatgagctcgacgaactacccaagctggataagcagaagaagcactccatc
gatgtggtagtcgaccgcttcaaggtccgcggcgatctgcagcaacgcctggccgaatcc
ttcgagaccgcgctcaagctggccgatggcatcgccctggtcgcttccatggaagaggaa
gacgaaagcgaagagatgatcttctccgcgcgcttcgcctgtccgatctgcggccactcg
atcagcgagctggaacccaagctcttctccttcaacaacccggccggcgcctgcccaacc
tgtgacggcctgggcgtgaagcagttcttcgacgccaagcgcctggtcaatggcgaactg
accctggccgaaggcgccatccgtggctgggaccggcgcaacgtctactacttccagatg
ctcggctcgctcgcctcgcattacgggttcagtctggacgagcctttcgactcgctggca
gccgatcaccagaagtccatcctgcgcggcagcggccgcgagagcgtcgagttccgctac
ctcaacgaccgcggcgacatcgtcaagcgctcgcacccgttcgaaggaatcattcccaac
ctggaacgccgctaccgcgaaaccgaatccaattcggtgcgtgaagaactggccaagtac
ctcagcacccagccctgcccagactgtcgcggcacccgcctgcgccgcgaggctcgccac
gtatgggttggcgacaggactttgccggcggtcacggccatgcccatcggcgacgccact
gattatttcggcggactctcgctcagcggtcgacggggcgaaatcgccgacaagattctc
aaggaaatccgcgaacgcctgcagttcctggtcaacgtcggcctggattacctgaccctc
gaccgcagcgccgacaccctgtccggcggcgaagcccagcgcatccgcctggccagccag
attggcgcaggcctggtcggcgtgatgtacatcctcgacgagccttcgatcggcctgcac
caacgcgacaacgagcgcctgcttggcaccctgcgtcacctgcgcgatatcggcaacacg
gtgatcgtggtggagcacgacgaggacgcaatccgcctcgccgactacgtggtggatatc
ggcccaggggccggcgtgcacggcgggcgcatcgttgccgaaggcacgccggacgaagta
atggcacacccggactcgctgaccggcaagtacctctctggccgggtgaagatcaactac
cgacccgaacgcacccgccgtgatccgaagaagctgctcaaactcaagggcgcgcgtggc
aacaatctgcgcaatgtggacctggaaatcccggtgggcctgctcacctgcatcaccggc
gtttccggctcgggcaagtcgacgctgatcaacaacacgctgtttccgattacggccacc
gcgctcaacggtgcgtccacactggaagtggccccgcacgacagcttcgatggcctgcag
catctggacaaggtagtggacatcgatcagagcccgatcggccgcaccccccgctccaac
ccggcaacctataccggactgttcacgccgattcgcgaactgttcgccggtgtgccggaa
gcacgttcgcgcggctatggcccgggacgcttctccttcaacgtcaagggcggccgctgc
gaagcctgccagggcgatggcgtgatcaaggtggagatgcactttctgccggacatctac
gtgccctgcgacgtctgcaagggcaagcgctacaaccgcgaaacgcttgaagtgaaatac
aagggcaagagcatcactgaggtgctcgacatgaccatcgaggaagcccgtgaattcttc
gacccggttccggccgttgcgcgcaagctgcagacgttgatggatgtggggctttcatac
atcaagctggggcagagtgcgactaccctctccggcggtgaggcgcagcgcgtcaagctg
tcccgcgagctgtccaagcgcgataccggcaagacgctgtatatcctcgacgaacccacc
accggcttgcacttcgccgacatccagcaattgctcgacgtgctgcatcgcctgcgcgac
cacggcaataccgtcgtggtgatcgagcacaatcttgacgtgatcaagaccgctgactgg
ctggtggatctgggtccggaaggtggctccaagggcggccagatcatcgcctgcggcaca
ccggaagaagtcgcggggatggcgcagtcacataccggccatttcctcaagccattgctg
gaacgcgaccgctcggcgggttga
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