Plesiomonas shigelloides: SAMEA2665130_0384
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Entry
SAMEA2665130_0384 CDS
T04378
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00300
Lysine biosynthesis
pshi00550
Peptidoglycan biosynthesis
pshi01100
Metabolic pathways
pshi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMEA2665130_0384 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA2665130_0384 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMEA2665130_0384 (murF)
Enzymes [BR:
pshi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SAMEA2665130_0384 (murF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
NmrA
Motif
Other DBs
NCBI-ProteinID:
SBT59960
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Position
1:399948..401324
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AA seq
458 aa
AA seq
DB search
MIALSLEQLAQVVGGKLLASAPEAQRAIGEVTTDTRKVTAGALFIALRGERFDAHDFAAQ
AQEQGAAALLVERELPLAVAQIVVADTRLALGQLGHWVRTQCRARVVAMTGSSGKTTVKE
MTAAILAQRGNVLYTAGNFNNDIGVPLTLLRLTSEHDYAVMELGANHIGEIAYTTALVQP
EAALVNNVMAAHLEGFGSLAGVRQAKGEIYQGLSETGTAIVNLDIDEHQSWQPALQGKTV
RTWSMRQPADYTASDIRCARGLTTFTLHTPEGEQAIALPYPGLHNVSNALAAAALSLAVG
ASLSDVAAGLASLQPVKGRLYPLALTPSLLVWDDTYNANVGSMKAGIAVLAQHAGLRILI
AGDMGELGDESAECHQAVGDAARDAGIDQVFTVGVLSQAISAPSQGQHFSDKAALLAVLL
PYVAQQLQQDANITLLVKGSRSAAMEDVVRALQETFTC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgattgccctgtcgttagaacaattggcgcaggttgtcggcggtaagctgctggccagc
gcaccagaggcgcagcgcgctatcggtgaggtgactaccgatacgcgtaaagtgacggcc
ggtgcgctgtttatcgccctgcgcggtgagcgctttgatgcccatgattttgccgcgcaa
gcgcaagagcagggcgcggcggcattgctggttgaacgcgagttaccgctggcggtcgca
caaattgtggtggctgatacccgcttggcgttaggtcagctaggccattgggtacgcact
cagtgccgagcgcgcgtggttgccatgaccggttcatcgggcaaaaccaccgtaaaagag
atgacggcagcgattttggcgcagcgcggtaacgtgctgtataccgcgggtaactttaat
aacgatatcggtgtgccactgacactgctgcgcctgaccagcgagcatgattatgcggtg
atggaattgggcgctaaccatatcggtgaaattgcctacaccacggcactggtgcaaccc
gaggctgcgctggtgaataacgtgatggcggcgcatctggagggctttggctcactggcg
ggcgtgcggcaggcgaaaggcgagatttaccaaggcttgagcgagacaggaaccgcaatc
gtcaatctggatatcgatgagcatcagagctggcaaccggcgttgcagggtaaaaccgtg
cgtacctggtcgatgcgccagccggcggattacaccgccagcgacattcgctgtgcgcgt
gggctgacgacctttaccttgcacacccctgagggtgagcaggcgatcgcgctgccttat
ccggggctgcacaatgtgtctaatgcgttagccgctgcggcgctgagtcttgctgtaggc
gcatcattatctgacgtggccgcggggttagcctcgcttcagccggtgaaagggcgttta
tacccattggcgctaacaccatcgctgttggtctgggatgatacctacaacgccaatgtc
ggttcaatgaaggcggggattgcggtattagcgcagcatgcagggctgcggattttgatt
gccggtgatatgggcgagctcggtgatgagagcgccgaatgtcatcaggcggtcggtgac
gcggcgcgtgatgccggtatcgatcaggtcttcaccgtcggcgttctgagccaagcgatc
agtgcaccaagtcaagggcagcatttcagtgataaagccgcgttgctggcggtattgctg
ccgtatgtcgctcaacaattacaacaagatgccaatatcaccctattggtgaaaggttcg
cgcagcgcagctatggaagatgtcgtgcgggcgctgcaggagacgtttacatgttag
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