Plesiomonas shigelloides: SAMEA2665130_2365
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Entry
SAMEA2665130_2365 CDS
T04378
Symbol
rpoE
Name
(GenBank) Sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pshi03021
]
SAMEA2665130_2365 (rpoE)
Transcription machinery [BR:
pshi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMEA2665130_2365 (rpoE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
Motif
Other DBs
NCBI-ProteinID:
SBT61841
UniProt:
A0A1A9AYW5
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All DBs
Position
1:complement(2587208..2587783)
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AA seq
191 aa
AA seq
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MSEQLTDQVLVERVQQGDKRAFNLLVARYQHKVAGLVSRYVPQGDVPDVVQESFIKAYRA
LGSFRGESAFYTWLYRVAVNTAKNYLVAQGRRPPSSDVDAEDAESYETGSALKEISNPEN
LMLSDELKRVVFGAIEALPEDLKMAITLRELDGLSYEEIASIMDCPVGTVRSRIFRAREF
IDSKIQPLIQR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagttgacagaccaagtgttggtcgaacgtgttcagcagggggataaacgc
gcttttaatcttctggttgcccgctatcagcataaggtggctggattggtttcccgttat
gtcccacagggcgatgtgcctgatgttgtgcaggaatccttcatcaaagcataccgtgct
ttggggtcgttccgtggcgagagtgctttttatacgtggttgtaccgtgtggcggtcaat
acggccaaaaactacttggtcgctcaggggcggcgtccaccaagcagcgatgtcgatgct
gaagacgcagaaagttacgaaactggcagtgcgttaaaagaaatatcgaacccagagaat
ctgatgttgtcagatgaactgaagagggtggtatttggtgctattgaagccttaccggaa
gacctgaaaatggcaattaccttacgtgagctagatggcctaagctatgaagagattgcc
agtatcatggattgcccggtgggaacggttcgttcgcggatcttccgtgcgcgtgaattt
atcgacagtaagatccagccgttaattcagcgctaa
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