Pseudomonas silesiensis: PMA3_30085
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Entry
PMA3_30085 CDS
T05412
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psil
Pseudomonas silesiensis
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psil03032
]
PMA3_30085 (gyrB)
03400 DNA repair and recombination proteins [BR:
psil03400
]
PMA3_30085 (gyrB)
Enzymes [BR:
psil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PMA3_30085 (gyrB)
DNA replication proteins [BR:
psil03032
]
Prokaryotic type
DNA Topoisomerases
PMA3_30085 (gyrB)
DNA repair and recombination proteins [BR:
psil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PMA3_30085 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ANJ59485
UniProt:
A0A191Z2R6
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All DBs
Position
6767448..6769865
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AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELVLTVRRSGKIWEQTYIHGVPKEPMKIVGESETTGTQIHFKPSDLTFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRLVMKTLKRLSR
LYPQELTEHFIYLPAVSMEQLSDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVSLGAQLSTLLDDGAYIQRGERKKPVTEF
KEALEWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSQRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagaaaatacgtacgactcaacgagcattaaagtgctgaaaggcctggatgcc
gtacgcaaacgtcccggtatgtacattggtgacaccgacgatggcagcggtctgcaccac
atggtgttcgaagtggtcgataactcgatcgacgaagctctcgccggccactgcgacgac
atcagcatcattattcacccggacgaatccatcaccgttcgcgacaacggacgtggcatc
ccggtagacgtgcacaaagaagaaggcgtttcggcagccgaggtcatcatgaccgtgctg
cacgccggcggtaagttcgatgacaactcctataaagtatccggcggtctgcacggcgta
ggtgtgtcggttgtgaacgccctgtccgaagagttggttctgaccgttcgccgtagcggc
aagatctgggaacagacctacatccacggtgttccgaaggagccgatgaaaatcgtcggc
gaaagcgaaaccaccggtacccagattcacttcaagccatccgacctgaccttcaaaaac
atccacttcagctgggacatcctggccaagcggattcgtgaactgtccttcctcaactcc
ggtgtcggcatcgtcctcaaggatgagcgtagcgggaaggaagagttgttcaagtacgaa
ggcggcctgcgtgcgttcgttgaatacttgaacaccaacaagacgccggtcaaccaggtg
ttccacttcaacatccagcgtgaagacggcatcggcgtagaaatcgccctgcagtggaac
gacagcttcaatgagaacctgttgtgcttcaccaacaacattccgcagcgcgacggcggt
actcacctggtggggttccgttcggccctgacgcgtaacctgaacacctacatcgaagcg
gaaggtctggcgaagaagcataaagtcgcgaccaccggcgacgatgcccgtgaaggcctg
accgcgatcatttcggtgaaagtgccggatccgaagttcagctcccagaccaaagacaag
ctggtttcttccgaagtgaagaccgcggtcgaacaggaaatgggtaagtacttctccgac
ttcctgctggaaaacccgaacgaagccaagctggtcgtcggcaagatgatcgacgcggca
cgggctcgcgaagcggcgcgtaaagcccgtgagatgacccgtcgcaaaggcgcgctggat
atcgccggcctgccgggcaaactggctgactgccaggaaaaagaccctgccctttccgaa
ctgtacctcgtggaaggtgactctgctggcggctccgccaagcagggacgcaaccgtagg
acccaggccatcctgccgttgaagggcaagatcctgaacgtcgagaaggcacgcttcgac
aagatgatctcttcccaggaagtgggcaccttaatcaccgccctgggctgcggcatcggc
cgtgacgagtacaacatcgacaagctgcgttatcacaacatcatcatcatgaccgatgct
gacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttgccg
gagctgatcgagcgcggctatatctacatcgcgcaaccaccgctgtacaaggtcaagaaa
ggcaagcaagagcagtacatcaaagacgacgacgccatggaagagtacatgacgcagtcg
gccctggaagatgcgagcctgcacctgaacgaggaagcaccgggtatctccggtgaagca
ctcgagcgtctggtgaatgacttccgcctggtgatgaagactctcaagcgtctgtcgcgc
ctgtacccacaggagctgaccgagcacttcatctacctgccggcggtgagcatggagcag
ctttccgatcacgctgccatgcaggattggttggcccagtacgaggttcgcctgcgcact
gtcgagaagtccggcctggtctacaaagccagcctgcgtgaagaccgtgaacgtaacgtc
tggctgccggaggttgaactgatctcccacggcctgtcgaactacgtcacgttcaaccgc
gacttcttcggcagcaacgattacaagacggttgtttcgctgggtgctcaactgagcact
ctgctggacgacggcgcgtacatccagcgtggcgagcgcaagaagccggtcaccgagttc
aaggaagcccttgaatggctgatggctgaaagcaccaagcgtcacaccatccagcgatac
aaaggtctgggcgaaatgaacccggatcagctgtgggaaaccaccatggacccaagccag
cgccggatgcttaaagtcaccatcgaagacgccattggcgcggaccagatcttcaatacc
ctgatgggtgatgcggtcgaaccccgtcgtgacttcatcgaaagcaatgccctggcggta
tccaacctggatttctga
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