Pimelobacter simplex: KR76_10805
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Entry
KR76_10805 CDS
T03528
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psim
Pimelobacter simplex
Pathway
psim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KR76_10805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psim03019
]
KR76_10805
03016 Transfer RNA biogenesis [BR:
psim03016
]
KR76_10805
Enzymes [BR:
psim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KR76_10805
Messenger RNA biogenesis [BR:
psim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KR76_10805
Transfer RNA biogenesis [BR:
psim03016
]
Prokaryotic type
tRNA degradation factors
KR76_10805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KhpA-B_KH
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AIY17116
UniProt:
A0A0A1DIB7
LinkDB
All DBs
Position
2225847..2228087
Genome browser
AA seq
746 aa
AA seq
DB search
MTEPVISAVETVLDNGKFGTRTVKFETGLLARQAAGSVTAYLDDDTMLLSATTAGKHPKD
HFDFFPLTIDVEERMYAAGKIPGSFFRSEGRPGEDAILTCRLIDRPLRPTFKKGLRNEVQ
VVITVMALNPDTPYDVLAINAASISTQLSGLPFSGPVGATRVALIEGQWVAFPTHSQLEN
AVFDMVVAGRVTETGDVAIMMVEAEATEQSWGLVTSGAQAPTEEVVASGLDAAKPFIKQL
VEAQQELANVAAKPVQEFPIFLDYEDDVFEAVEAASKADLAEAMTIGDKQEREARTDELK
AELLEKLSGQFEGREKEIGAAFRSVNKQVVRERVLRDKVRIDGRGLADIRPLHAEVDVVP
RVHGSALFERGETQILGVTTLDMLKMEQQLDTLSPETHRRYMHKYIFPPFSTGETGRVGS
PKRREVGHGALARRALLPVLPSREEFPYAIRQLSEAMGSNGSTSMGSVCASTLALLQAGV
PLKASVAGIAMGLISGEIDGKLEYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKL
DGIPAEVLAKALNQAKDARLAILEVMGEAIDGPEEMSVHAPRIITVKVPVDKIGEVIGPK
GKVINQLQDDTGASISIEDDGTVYIGATNGEAAEAARQAINAIANPTMPEVGERYLGTVV
KITNFGAFIALMPGKDGLLHITKLRALAGGKRIENVEDVVSVGQKLQVEIAEIDDRGKLS
LVPVVEEAASDEAAAEATEAGESDEA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaacccgtcatctccgccgtcgagaccgttctcgacaacggaaagttcggcacc
cgcaccgtcaagttcgagacgggcctgctggcccgccaggccgccggttcggtgaccgcc
tacctcgacgacgacaccatgctgctctcggcgaccaccgccgggaagcaccccaaggac
cacttcgacttcttccccctgacgatcgacgtcgaggagcggatgtacgccgcgggcaag
atccccggctcgttcttccgcagcgagggtcgtcccggcgaggacgccatcctcacctgc
cgcctcatcgaccgcccgctgcgcccgaccttcaagaagggtctgcgcaacgaggtccag
gtcgtcatcaccgtgatggcgctcaaccccgacacgccgtacgacgtgctcgcgatcaac
gccgcgtccatctcgacccagctctccggcctgccgttctccggcccggtcggcgccacc
cgcgtggccctcatcgagggtcagtgggtcgccttcccgacgcacagccagctcgagaac
gccgtcttcgacatggtcgtcgccggccgcgtcaccgagaccggcgacgtcgcgatcatg
atggtcgaggccgaggccaccgagcagtcgtggggcctggtcacctcgggcgcccaggcg
ccgaccgaggaggtcgtcgccagcggtctcgacgcggccaagccgttcatcaagcagctg
gtcgaggcccagcaggagctcgccaacgtggccgccaagccggtccaggagttcccgatc
ttcctcgactacgaggacgacgtcttcgaggccgtcgaggccgcgtccaaggccgacctg
gccgaggcgatgaccatcggcgacaagcaggagcgcgaggcgcgcaccgacgagctcaag
gccgagctgctcgagaagctctccggccagttcgagggtcgcgagaaggagatcggcgcg
gccttccgctcggtcaacaagcaggtcgtgcgcgagcgcgtgctgcgcgacaaggtccgc
atcgacggccgcggcctggccgacatccgtccgctgcacgccgaggtcgacgtcgtcccg
cgcgtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccacc
ctcgacatgctcaagatggagcagcagctcgacacgctctccccggagacgcaccgccgc
tacatgcacaagtacatcttcccgccgttctccaccggcgagaccggtcgcgtgggctcg
cccaagcgccgcgaggtcggccacggcgccctggcgcgtcgtgcgctgctgcccgtgctg
ccgagccgcgaggagttcccctacgcgatccgtcagctctccgaggcgatgggctccaac
ggctcgacctcgatgggctcggtctgcgcgtccacgctggcgctcctccaggccggcgtc
ccgctcaaggcctccgtcgccggtatcgcgatgggcctgatctccggtgagatcgacggc
aagctcgagtacgtcgcgctgaccgacatcctcggtgccgaggacgccttcggcgacatg
gacttcaaggtcgccggcaccaaggagttcgtcaccgcgctccagctcgacaccaagctc
gacggcatcccggccgaggtcctcgcgaaggccctcaaccaggccaaggacgcccggctg
gcgatcctcgaggtcatgggcgaggccatcgacggccccgaggagatgtcggtccacgct
ccgcggatcatcaccgtcaaggtgccggtcgacaagatcggcgaggtgatcgggcccaag
ggcaaggtcatcaaccagctgcaggacgacaccggcgcctcgatctccatcgaggacgac
ggcaccgtctacatcggcgcgaccaacggcgaggccgccgaggccgcccgccaggcgatc
aacgcgatcgccaacccgaccatgcccgaggtcggcgagcgctacctcggcacggtcgtg
aagatcaccaacttcggtgccttcatcgcgctgatgccgggcaaggacgggctgctgcac
atcaccaagctgcgcgccctggccggtggcaagcggatcgagaacgtcgaggacgtcgtc
tcggtcggccagaagctccaggtcgagatcgccgagatcgacgaccgcggcaagctctcg
ctggttcccgtggtcgaggaggccgcctccgacgaggccgcggctgaggcgaccgaggcc
ggggagtccgacgaggcgtga
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