Pirellula staleyi: Psta_2692
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Entry
Psta_2692 CDS
T01147
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
psl
Pirellula staleyi
Pathway
psl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Psta_2692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psl03021
]
Psta_2692
Transcription machinery [BR:
psl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psta_2692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
FTCD_C
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ADB17360
UniProt:
D2R6R0
LinkDB
All DBs
Position
complement(3471230..3472864)
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AA seq
544 aa
AA seq
DB search
MNHLGIELKELVAKGNTQGYLTYEDVNNYLPDQDVNPEKLDNLLVALEHAGIELVDQPPV
EPGKPRLFVPRESDAVPLKPEESKKLNSDPIRLYLSQMAEIPLLSRQEEISLAKKIEVTR
KRFRRTILSCDYAMRATVQTLTQVYAGELPFDRTIKVSLTEQLTKEQILARMPHNLRSIE
QLLGRNKKAFGKLIRPSTSREERQQSRRTFLRGRGKCLQLVEELSLRTRRVQPLMKEMEQ
LASRMERVRARLKAIKQEDGRRFERRSLRRELHHLMMETLESPRSLRARCVAMQRQYIEY
EAAKRQLSSGNLRLVVSIAKKYRNRGLSFLDLIQEGNTGLMRAVDKYEYRRGFKFSTYAT
WWIRQAITRAIADQARTIRIPVHMIDVLSKLRNVQKKLLQELGREPTTEEVTALVDLPLE
EVKRVLDIGRHPVSLDRPVGDSEDSSFGEFIEDTASDNPVLCATNGILRERIDGLLKTLT
WREREIIRLRYGLCDGYTYTLEEVGRIFKVTRERVRQIEAKAVRKLQHPVRSKQLEGFLK
QMAS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcttggaatcgaactaaaagaattggtcgccaagggaaacacccaaggctat
ctgacctacgaagacgtcaacaactatctgcccgatcaagacgtcaatcctgaaaagctc
gacaacctgctcgtggcactcgaacatgccggaatcgaactggtggatcagccaccggta
gagccaggcaaacctcgtttgtttgtaccgcgcgaaagcgatgcagttccgctgaagcct
gaagagagcaaaaagctcaacagcgatccgattcgactctacctctcgcaaatggcggaa
atcccgctcctttcgcgtcaggaagagatctcgctggccaaaaaaatcgaggtgacgcgc
aagcgtttccgccgcactattttgtcgtgcgactatgcaatgcgcgccaccgtgcaaaca
ctcacccaagtgtacgccggtgaattgcccttcgaccggacgatcaaagtttcgctcacc
gagcagctgaccaaggaacagattctggcacgcatgccgcacaatttgcgttcgatcgag
caattgctcggccgcaacaaaaaggcgttcggcaagttgattcgtcccagcacttcgcgc
gaagaacgtcagcaatcgcgacgcacgtttttgcgaggacgaggcaagtgcctgcaattg
gtcgaagagctcagtttgcgcacgcgccgcgttcagccgctgatgaaagagatggagcaa
ctcgcatcgcgtatggagcgcgtccgtgctcgtctcaaagcaatcaagcaggaagatggc
cgacgcttcgagcgtcgctcgctccgccgcgaacttcatcacctgatgatggaaacgctc
gaaagcccccgttcgctccgcgctcgctgcgtggcaatgcaacgtcagtacatcgaatac
gaagcagcgaagcgtcaactctcgagcggcaacttgcggctcgtggtgtcgatcgccaag
aagtatcgtaatcgtggactctcgttcctcgacctgattcaggaagggaacaccggcctg
atgcgcgcggtggacaagtacgaatatcgtcgtgggtttaagttctcgacctatgccaca
tggtggattcgtcaggcgattacacgcgcgattgctgaccaagcacgtacgattcgcatt
cccgtgcacatgatcgatgtcctttcgaagctgcgcaacgtgcagaaaaagttgctgcaa
gaacttggccgcgaaccgacgaccgaagaagtgaccgcgctcgtcgacttgccgctcgaa
gaagtaaagcgcgtgctcgacatcggtcgtcatccggtgagccttgatcgcccggtgggt
gacagtgaagactcgagctttggcgagttcatcgaagatacggccagcgacaatcccgtg
ctctgcgcgaccaatggcatccttcgtgaacggattgatggcctgctgaagaccctcacg
tggcgcgaacgcgaaatcattcgccttcgttacggcctgtgcgacggctatacctacacg
cttgaagaggtaggtcgcattttcaaagtgacccgcgaacgtgttcgtcaaatcgaagcc
aaagcggtccgaaaacttcagcatccagtgcgcagcaaacagctggaaggctttttgaag
caaatggcgagctag
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integrated database retrieval system
