KEGG   Pirellula staleyi: Psta_3991
Entry
Psta_3991         CDS       T01147                                 
Name
(GenBank) RNA polymerase alpha subunit domain protein
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
psl  Pirellula staleyi
Pathway
psl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Psta_3991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psl03021]
    Psta_3991
   03400 DNA repair and recombination proteins [BR:psl03400]
    Psta_3991
Enzymes [BR:psl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Psta_3991
Transcription machinery [BR:psl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Psta_3991
DNA repair and recombination proteins [BR:psl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Psta_3991
SSDB
Motif
Pfam: RNA_pol_A_CTD TPR_2 TPR_16 TPR_1 TPR_6 TPR_19 TPR_14 ANAPC3 TPR_12 TPR_17 TPR_8 MIT TPR_7 TPR_11 TPR_9 TPR_10
Other DBs
NCBI-ProteinID: ADB18645
UniProt: D2R234
LinkDB
Position
complement(5187960..5189282)
AA seq 440 aa
MASVQVDIRDIVLSNSSFGPREITNLSQTIAEDYAQFGVLRDAVGELEVREDRTPAAAVR
LGVCYYLLGRYRSAAETLSSADGGAVAHYYLGKTRFAMGQYADAIKAYAAAKVAGYNSDD
TSLATAEAQRYEKQPQKAIETLDKLSGAVEQTAEYLYQRGATVAALGGSPVEVVALFERA
VEADGRHPGALFGLAVENDRHGNDELALQLYQRAAGTFPTNVGTLINLGILYEDRQAYDR
AQQCYNRVLEAFPEHPRARLYSKDAAASGNMLFDEEAQRRNDRLAQVLSIPVTDFELSVR
SRNCLQKMGVRTLGDLTRTSEQELLASKNFGETSLVEIRDMLHSKGLELGQFAAEKAVAE
PVLDLASMSPDEQALLERPISELNLSVRARKCMARLGLTLIGELVRKTGDDLLECKNFGV
TSLNEVREKLTTLGIKLRGD
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcgagtgtgcaggtcgatattcgcgacattgttttgtcgaactcttcgtttggtcct
cgtgaaatcaccaatctctcgcaaaccattgccgaagattacgcccaattcggcgtgctt
cgcgatgctgtgggcgaactggaagttcgcgaagatcgcaccccagccgctgccgtgcga
ctcggtgtttgctactacctcctcggccgttaccgctctgctgccgagactctctcgtcg
gctgatggtggcgctgtagctcactattacctcggtaaaacccgcttcgcgatgggccag
tacgccgacgcgatcaaggcctatgccgctgcgaaggttgccggctacaacagcgacgac
acgtcgctcgccacggccgaagcccagcgctacgaaaaacagcctcagaaggcaattgaa
acgctcgacaagctatcgggcgccgtcgagcagaccgctgaatacctgtatcagcgcggc
gcaaccgtggctgctcttggtggcagtccggtggaagttgtcgcgctgttcgaacgtgct
gtggaagccgatggtcgtcatcctggcgccctgttcggcctcgcggtcgagaacgatcgc
catggcaacgacgaactcgccctgcagctctatcaacgagccgctggcacattccccacg
aacgtcggcactctgatcaatctcggcatcctgtacgaagatcgtcaggcctacgaccgt
gctcagcagtgctacaaccgtgtgctcgaagccttccccgaacacccacgtgctcgcctc
tactcgaaagatgctgctgcctcgggcaacatgctcttcgacgaagaagcccagcgccgc
aacgatcgtttggctcaggttctcagcattcctgtgaccgacttcgagctttcggttcgc
agccgcaactgcctgcagaagatgggtgttcgcaccctcggcgatctcactcgcacttcg
gagcaagagctgctggcgagcaagaattttggcgagacctcgctcgtcgaaatccgcgac
atgctgcatagcaagggacttgagctcggccaattcgccgctgaaaaagcagtggctgaa
ccggtgctcgacctcgcttcgatgtcccccgacgaacaggctttgctcgaacgtccaatc
tcggaactcaacctctcggtccgtgctcgcaagtgcatggctcgccttggtttgaccctg
attggcgagctagtacgcaagactggcgacgatcttctcgagtgcaagaacttcggcgtt
accagtctcaatgaagtgcgcgaaaagctcacgaccctcggcatcaagctccgaggtgac
tga

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