Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_18530
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Entry
NIBR502771_18530 CDS
T06121
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psni03016
]
NIBR502771_18530 (truB)
Enzymes [BR:
psni01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NIBR502771_18530 (truB)
Transfer RNA biogenesis [BR:
psni03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIBR502771_18530 (truB)
Prokaryotic type
NIBR502771_18530 (truB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Saf-Nte_pilin
Motif
Other DBs
NCBI-ProteinID:
QDG64106
UniProt:
A0A4Y6QU74
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All DBs
Position
complement(3978418..3979491)
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AA seq
357 aa
AA seq
DB search
MPAILAVPCPASVPPGDVAAWWGAAVVRTLPVPCTCAPTCAHILGGVLSGLVIVDKPQGW
TSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVLGINKATRLLTYIVGTSKTYTATIRLG
QSTVTDDAEGEVTATTSAAGITDQQIDDGVAALTGDIQQVPSSVSAIKVNGERAYARVRS
GEDVKLAARPVTIHRFDVHGIRRDDAAGVVDLDVTVECSSGTYIRALARDLGNGLGVGGH
LTALRRTQVGPYSLEQARTLEQLAGELNVLDMSLAARALMPNRELTAEETAEISFGRRIA
AGAAPGTAGAATVEHPAAAFAPDGSLMALLADAGSYAKPVLVFAPGTGPAATAPAEA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatcctagccgtcccctgccctgcctccgtcccgcccggtgacgtggccgcg
tggtggggcgccgccgtcgtccgcaccctgccggttccctgcacatgcgccccaacctgc
gcccatatactgggaggcgtgctttctggactggtgatagtggacaagccgcagggatgg
accagccatgatgtggttggccggatgcggcgcctcgcagggacccggaaagtggggcac
gcaggaaccctcgatcccatggccaccggtgtcctggtgcttggcatcaacaaagccacc
cggctgctgacctacatcgtgggcacctccaagacctacaccgccaccatccggctgggg
cagtccacagtgaccgacgacgcggagggcgaggtcacggccaccaccagcgctgccggc
atcacggaccagcagatcgacgacggcgttgcggcgctcacgggcgacatccagcaggtg
cccagcagcgtcagcgcgatcaaggtcaacggcgaacgggcgtacgcgcgcgtccggtcc
ggcgaggacgtcaagctcgccgcgcgccccgtcaccatccaccgctttgatgtccacggc
atccgccgggacgatgcagcaggggtggtggacctggacgtgacggtcgaatgttcgtcc
ggcacgtatatccgcgccctggcccgggacctcggaaacggccttggcgtcggaggccac
ctcacggcgctccgccggacccaggtgggcccctactcccttgagcaggcgcgtaccctg
gaacagctcgccggtgaactcaacgtcctggacatgtccctcgccgccagggcgctgatg
cccaaccgcgaactcaccgccgaagaaaccgccgaaatctccttcggacggcggatcgcg
gccggtgccgcccccggcaccgccggcgccgccacggtggaacaccctgccgcggccttc
gctccggacggcagcctgatggcccttcttgccgacgcgggcagctacgccaaaccggtc
ctggttttcgccccaggcaccggcccggccgcaaccgcgcctgcggaggcatag
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