KEGG   Phytophthora sojae: PHYSODRAFT_309762
Entry
PHYSODRAFT_309762 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
psoj  Phytophthora sojae
Pathway
psoj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHYSODRAFT_309762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psoj03019]
    PHYSODRAFT_309762
Enzymes [BR:psoj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     PHYSODRAFT_309762
Messenger RNA biogenesis [BR:psoj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PHYSODRAFT_309762
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PHYSODRAFT_309762
SSDB
Motif
Pfam: Exo_endo_phos AFOR_N Tri3
Other DBs
NCBI-GeneID: 20643188
NCBI-ProteinID: XP_009516676
JGI: Physo3_309762
UniProt: G4YJ67
LinkDB
Position
Unknown
AA seq 311 aa
MKTPGMRELRDGAAAGTSQKLLVMTYNVLAQCYVRSSFFPYCKPSELRWKNRSKNLEAVF
ASSLPVSPDVICLQEVDNYSEFWADSMKKLGYDGLFIKKTSTKPDGVAVFWNAKKLKVKE
STHVNLDLPNGDESGEASQRGSVGAIVHFEHVDTPLDFVVATTHLFWDPMQEDVKLLQSR
RMLRTIEVFTRTLDASIPTIFSGDFNSLPDSKVYSFITEGNHFNSAYAQYGPDGEPPFTN
VNGDAKTDDGKLVPRFVGTLDYIFYRSPRIRPAALMEIMSFEDASKEVALPSTISPSDHL
PLLCEFHIQQQ
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaagacgccgggcatgcgcgagctgcgcgatggcgccgcggctgggacctcgcagaag
ctgctggtcatgacgtacaacgtgctggcccagtgctatgtgcgttctagcttcttcccg
tattgcaagcccagcgagctgcggtggaagaacaggtccaagaacttggaagcagtcttc
gcctcgagcctcccagtctcgcccgacgtcatctgtctgcaggaagttgacaattacagc
gagttttgggctgattcgatgaagaagctcggatacgacggcctcttcatcaagaaaacg
agcaccaagccggacggcgtagctgtgttttggaatgcgaagaagttgaaggtgaaggaa
tccacgcacgttaacctggacttgcctaacggagacgaatcaggtgaggcttcccagaga
ggcagcgtcggtgcaatcgtccacttcgagcacgtcgatacaccgttggatttcgtagtc
gcgacaacgcacttgttttgggatccgatgcaagaagacgtgaagctgctgcaatcgcgc
cgaatgctgcgcacgatcgaggtgtttacacgcacgctggatgcctccattccgaccatc
ttttcgggcgacttcaactcgctgccagacagtaaggtctacagcttcatcactgagggc
aaccacttcaacagcgcttacgcacagtacggtccagacggtgaaccccccttcacgaac
gtcaatggtgacgctaaaacggatgacggtaagctggtgccgcgcttcgtcggcacactg
gactacatcttctaccgttcccccaggatccggccggcggcgctcatggagatcatgtcg
ttcgaagacgccagcaaggaggtcgctctgcccagcaccatctctccgtcggaccacctc
cctctgctctgcgagttccacatccagcagcagtag

DBGET integrated database retrieval system