Papaver somniferum (opium poppy): 113271654
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Entry
113271654 CDS
T05758
Name
(RefSeq) serine hydroxymethyltransferase 2, mitochondrial-like isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00260
Glycine, serine and threonine metabolism
psom00460
Cyanoamino acid metabolism
psom00630
Glyoxylate and dicarboxylate metabolism
psom00670
One carbon pool by folate
psom01100
Metabolic pathways
psom01110
Biosynthesis of secondary metabolites
psom01200
Carbon metabolism
psom01230
Biosynthesis of amino acids
psom01240
Biosynthesis of cofactors
Module
psom_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
113271654
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
113271654
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
113271654
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
113271654
Enzymes [BR:
psom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
113271654
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Gene cluster
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Motif
Pfam:
SHMT
Beta_elim_lyase
DUF2891
Motif
Other DBs
NCBI-GeneID:
113271654
NCBI-ProteinID:
XP_026377337
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Position
4:155022520..155029215
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AA seq
538 aa
AA seq
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MLTSPESITHDAFTIFLSSPSASSTIRLCSYMIKDYTGNGEYNIEGSEKVVAMGRMCNGV
YYLKSEPPQIQTRSSLAGDSNNNEWLKQLNTPLKDADPEIAKILDFEKASQWQGFELVPS
ASVTSTSVMDVLGSTMTNKYTEDYPGVVYDDEGITQDYPDLSYDIEVRVTLIETPRSIDK
AERFCQFRALSLFGLNPAEWGVNVQSISRSTAMFEVYTALLTPRGKIMHFPSYETASEHF
NSRPYKLDRAGYIEYNQLEQQVGMFKPNLIVAGATGYPRSFKYERMRTFCNKTKAFLVAD
VSDIAGLIVADQISSPFKHADVVIISTQRSLCGPRGALIFYKKGQKFIKNGKERTIEDSI
NKAVFPGFQGGPHNQTIVALAVALKQANTQEYKTFQERIVKNARKFAETLKDLGYKIVTD
GTDNHLVVVNLGNSGIDAQRVLKIMEVACITADRNMSPDGIQMGSLVLTSRGFIEEDFVA
VAGFFNEAVKLALKNRSSWHSVDAPISEGFQELIQQLKDKVVKYAEKFPQVGISKMNV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctgactagcccagagtctatcacccatgatgctttcacaattttcctatcatcacct
tcggcatctagtaccatcagactttgttcatatatgattaaagattatactggcaatgga
gaatacaacatagaaggatccgaaaaggttgtggcaatgggtcgaatgtgcaacggagta
tactatctcaaatcagagccgccacagattcaaactcggtcatccttagctggtgattct
aataataacgaatggttaaagcaactaaatactcctttgaaggatgcagacccagagatt
gctaaaattcttgattttgagaaagctagtcaatggcagggatttgaattggtgccttct
gcgagtgtcacgtctacatcagtgatggatgttctcggatctactatgacaaataaatac
acagaggactatcctggtgttgtatatgatgatgaaggaataacacaagattatcctgat
cttagttatgacattgaagtaagagtgacactcattgaaactccaagatcaatcgacaag
gcagaaagattttgtcagttccgtgctttgagcctgtttggtttgaaccctgctgaatgg
ggagttaacgtgcaatcaatttctcgatcgactgccatgtttgaagtttataccgcactc
ctaacgccacgagggaaaattatgcattttccatcgtacgagactgcttctgaacatttt
aacagccgcccatataaattagacagggccggctacattgaatataatcagttggagcag
caagttggtatgtttaagccaaatctaatagttgctggtgcaactggatatccacgctcc
ttcaaatacgaacgaatgcgcacgttctgcaacaagacgaaagcttttctggtggccgat
gtatctgatatagctggcttgatagtcgcggatcaaatttcttctcctttcaagcatgca
gatgtagtgatcatttcaactcaaagatccctatgtgggccacgtggagccctgatcttt
tacaaaaaggggcagaagtttatcaaaaatggaaaagagcgtacaattgaagacagcatc
aataaagctgtctttccaggatttcaaggtggtccccacaaccagacgatcgtggcctta
gcagtggcactgaagcaagccaatacacaggagtataaaacctttcaggagcggattgtt
aaaaacgcaaggaagtttgccgagactttaaaagacttgggctataaaattgtcactgat
ggaactgacaaccatttggttgtggttaacctgggaaacagtggtattgatgcccaaaga
gtcctgaagataatggaggttgcttgtattactgcggatagaaacatgagtcctgatggg
attcaaatgggatctcttgtcctcacctcaagggggtttatcgaggaggactttgttgca
gttgcaggattttttaacgaagcagtgaaactagccttgaagaacagaagctcatggcac
tcagtggatgcacccatcagtgaaggttttcaagagctgattcaacagttaaaggacaag
gttgtgaaatacgcggaaaaattcccccaagttgggattagcaagatgaatgtatag
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