Papaver somniferum (opium poppy): 113284829
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Entry
113284829 CDS
T05758
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113284829
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psom01001
]
113284829
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113284829
03036 Chromosome and associated proteins [BR:
psom03036
]
113284829
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
113284829
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113284829
Protein kinases [BR:
psom01001
]
Serine/threonine kinases: Other
TAF1 family
113284829
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113284829
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
113284829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
Rad60-SLD
zf-CCHC_6
DUF6088
zf-CCHC_2
DZR_2
MecA_N
Motif
Other DBs
NCBI-GeneID:
113284829
NCBI-ProteinID:
XP_026389967
LinkDB
All DBs
Position
1:complement(45021600..45032351)
Genome browser
AA seq
1824 aa
AA seq
DB search
MVTSAMSTPSPVTDDEDDYEEADEKNGLLGFMFGNVDGAGELDADYLDSDAKEHLGALAG
DLGPSLTDIDLSVKLAKESADASEEDYDEKAEDAVDYEDIEEQYEGPETRAISEEDHLLS
KKEFIDAKMPLATAAHSTSVFGEENYDEEPEGDDIDEEHTLVSSEEIPPSAGENLELVSE
EENSPANIMPSLEPIVADSLSVDLKDIQEDDDLPNKEELKENTVSLPILCIEDGVPVLKF
SKLFSVHVPFRKMEQINHRYPISKGRLETVDPSEMVEEDEEDFLRGSCQISSNSKLGVVS
QYDDASVIASDGGSIMLGVGQGIGMRESPAFEQTKVTRLSSQPMKESVSFDLASERVSPS
CPHTDLLDQQDWETEIICNSSPQVGPESPERSIISGSDIEGSSSVEIDSGNKTGDFDLDV
TVKPAEEVHCVFLSSYPVSVEPFDFRKISGSSGLPLMEMCHPQLLRLESRSKDDGISRIS
KMLSLRNIELLDGSWLDQIIWEFKQDLPKPKLILDLRDERMLFEVSDDKDGGNLRFHAGA
MLVSRSVESNSGDSLDIPGQGGEVSEFNISNDRYYLNRKMSQQSESHSKKRTAHGVKIYH
STPGLMLQTMKPKLSNKDIACFHRPKAVWYPHDNKVAAEKLGKLSTQVPMKIILKSMGGK
GSKFQVAAEDIVSYIKTRASKKLDFTSSELVKIIYMGKELEDSKSLAMQNVRPNSVLHLV
RTNIHLWPRAQKVPGENMSLRPPGAFKKVPDLSVKDGHVFLMEYCEERPLLIGNAGMGAS
LCNYYKKSAPSDQAASALRSECGGSSVGTVISLDPADKSPFLGDIRPGCTQSCLETNMYR
APVFPHKFPSTDFLLVRSAKGKLSLRHIDRIHVVGQQEPHMEVISPGSKNLQTYIGNRLL
VYIYRVFSANEKRGMPPRIGVDELAAQFPSLSVPILRKRLKHCADLQKGTNGQLFWVMRR
SFRIPVEEELRRQLTPENVCCYESMQAGLYRLKRLGISSLTHLTDLCSAAMNQLPDEAIA
LAASSHIERELQITPWNLTSNFVTCTNQDRENIERLEITGVGDPSGRGLGFSYVRVASKS
LISSAVLQKKKVAPRVGGTTVGGTDAVLRKLSNDGAREVLLKFNIPEDTIAKQGRWHRIA
MVRKLSSEQASVGVKVDSTTIGKHARGQQMSFLQLQQQAWEKCQKIWDRQLQNLSAAEND
ENESDSEANSDLDSFAGDLENLLDAEECGEAEVSSNESKQNNTDGIRGLKTRRHPPQVQA
EEEIEDEAAETAELCRMLMDEKKKKKVVRGGEELNWQRDLSAERINKTNGCVKQGIRTAQ
PDGPPLMSMENTFRDQKKLESILGKRNFSGISKSKKGNLENDKVSKKHPSGKRERYVCSA
CGQEGHMRTNKYCPRYGEDMDTHVENSGMERISGKLNPHDSSAQPKSSIKKIIPKTASRN
VPTEASEKIEKTKTFQLKVKCGLPDNPRDQISAATQSSDKQDEMESRIISKYSKITISSK
MKSEDFYGEPQKQPSVVIHPPSDIEKYPRRKIIIKQLKVDQVKEEVHDDIQEEHRKTEKM
MQLSFEILRKQEQKRLADETAAKRKAKDDKKFWEEENKRREREIILCQERVMQLEQNRLA
EAKRYREALQQREKEELERQKIIKKKKKVKLEETGDDYYLEEPRGYRTSRRMPERSCAAK
KRPAVDSFARCGPEYCQQTKRHRGGGGQVGLSNALEDILDGLKNSEVSYLFLKPVSKKDA
PDYLDIIEHPMDLSTIRDKVRRMEYKTREEFRQDVWQITYNAHMYNNNRNPGIPPLADQL
LQLCDYFLDQYDERLTEAEAEAGI
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggttactagtgcaatgtcaactccatctccagtcacagatgatgaagatgactatgag
gaggctgatgaaaaaaatggtctcttgggatttatgtttggaaatgttgatggtgctggt
gagcttgacgctgattaccttgattcggatgcaaaggagcatcttggtgcattggctggg
gatttgggtccatcactgacagatattgatctgtcagtaaaattagcaaaggaatctgca
gatgcttctgaagaagattatgatgaaaaggctgaagatgctgttgattatgaagacatt
gaagagcagtacgaagggcctgagactcgagccatctcagaggaagaccatttgctgtca
aagaaagaatttattgatgctaaaatgccattggccactgctgcacatagtacttctgtt
tttggtgaggagaattatgatgaggagcccgagggagatgatattgatgaagaacataca
ttggtttcatcagaagaaattcctccttcagcaggtgaaaatcttgaattggtttctgag
gaagaaaattctcctgcaaatattatgccttctcttgaaccaattgtagctgatagcctg
tccgttgatttgaaggatattcaagaggatgatgatcttccaaataaagaggagttgaag
gaaaacacggtttcattgcctattttgtgcatagaagatggagtgccggtgttaaagttc
tctaaacttttcagtgttcatgtgcccttcagaaaaatggagcagataaaccataggtat
cctatttcaaaagggaggcttgaaacagtggatccttctgagatggttgaagaggatgaa
gaagattttcttcgggggtcgtgtcaaatttcgtctaattctaaactaggggttgtttct
caatatgatgatgcatctgtgatagctagtgatggaggatcaataatgcttggtgttggg
caagggattggtatgagggaatcaccagcttttgaacaaacaaaagtcacccgtctcagt
tcacagccaatgaaggagagtgtttctttcgatttggcttcagaacgggtatcaccatct
tgtccccatactgaccttctcgatcagcaagattgggaaactgagatcatttgcaacagt
tctcctcaagtgggtccagaatcccctgagaggtcgataatatctggcagtgatattgaa
ggttcctctagtgtagaaatagattcgggaaataagacaggagatttcgatttagatgtc
acagttaaacccgctgaagaggttcattgtgttttcctcagcagctaccctgtttctgtt
gaacctttcgactttagaaaaatttcaggctcgtctggccttcctttgatggaaatgtgt
cacccccaattattgagattagaatctcgttccaaggatgatggtataagtcgtattagc
aaaatgctttcgttgagaaacatagaattgctggatgggtcttggttagaccaaattatt
tgggaatttaaacaagatcttccaaaacctaaacttatccttgatcttcgggatgagcgg
atgctttttgaagtttcagacgataaggatggtggaaatctccgatttcatgctggggct
atgttagtctctcgatctgtggagtcgaatagcggagattctttggatattcctggtcaa
ggaggagaggtgtctgaatttaatatttctaatgacaggtattatttgaatagaaaaatg
tctcagcaatcagaatcacactcaaaaaagcgcacagctcatggagtcaagatctatcat
tcaacacctggtctgatgcttcaaactatgaagccaaagttgagcaataaagacattgct
tgctttcatagaccaaaagccgtatggtatcctcatgacaacaaagtagcagcggaaaaa
ctagggaagctatctacacaggttcccatgaaaataatcctgaagagcatgggggggaaa
ggtagtaaatttcaagtggctgctgaggatatcgtatcttatattaaaacaagggcctca
aaaaagctagatttcacatcatcagaactagttaaaatcatttatatgggaaaggagctt
gaagacagtaaatctcttgctatgcaaaatgttcgtccaaactctgttctacatcttgtg
cgcacaaatatacatctgtggccaagagcccagaaggtgcctggtgaaaatatgtcatta
cgtcctcctggggcttttaagaaggtgcccgacctttctgtgaaggatggacatgtcttc
ctaatggaatactgcgaagagaggcctttacttatagggaatgctgggatgggcgcaagc
ctctgcaattactataaaaagtcagcacctagtgaccaagctgcctcagcacttcgcagc
gaatgtggtggtagtagtgttggcactgttatttcgcttgatcccgcggataaatccccc
ttccttggtgacattagacctggttgcactcagtcgtgtcttgaaacaaacatgtacaga
gcacctgtatttcctcataagtttccctcaacagacttcttgttagttcggtcagcgaag
ggaaagctttctcttagacatatagacagaatacatgttgtcggacagcaggaaccacat
atggaagttatttctcctgggtcaaaaaatctccagacgtatatcggaaacagactattg
gtgtatatataccgtgtttttagtgccaatgagaagcgtgggatgcctccgcgcatcgga
gtagatgagttagctgcccagtttccttctttgtctgtacccattcttcggaaaaggttg
aaacactgtgctgatttacagaaaggaacaaatgggcagttattttgggttatgagacgc
agttttcggattccagtggaagaagaacttaggaggcagctgacacctgaaaatgtttgt
tgctatgaaagcatgcaagctgggctttaccggcttaaacgtttagggataagcagcctg
acgcaccttactgacctatgttctgctgcaatgaaccaacttccagatgaagccattgcg
ttggctgcttcatcacacattgagagggagctacagataaccccctggaatcttactagc
aacttcgtcacctgtacaaatcaggacagagaaaatattgagcgacttgagattacagga
gtcggtgatccatctggccgtggcctaggtttcagctatgtacgtgttgcctcgaagtcc
cttatatccagcgcggtactgcagaaaaaaaaagttgctcctcgtgtgggagggaccaca
gtcggtggaacagatgctgttctgcgtaagttaagcaacgatggggctcgcgaggtgcta
cttaagttcaacattccggaggatacaattgcaaaacaaggtaggtggcatcgtatcgct
atggtacgaaagctttctagtgagcaagcgtctgtaggggttaaagttgattcaacaacc
atcggcaagcatgcacgtggccagcagatgtcatttcttcagctacaacagcaggcctgg
gaaaaatgtcaaaaaatttgggatcgacagcttcagaatctttcagctgccgagaacgac
gaaaatgagagtgactctgaggctaatagtgatctagattcttttgctggggaccttgaa
aatctgttggatgcagaagaatgtggggaagctgaggtgagtagcaatgaatctaaacaa
aacaatactgatggtattagaggactcaaaactcggaggcatccacctcaagttcaagca
gaggaagaaattgaagatgaagcagcagaaacagcagaattgtgcaggatgctcatggat
gaaaagaagaaaaagaaagttgttaggggaggggaagagttgaactggcagcgagattta
agtgctgaacggatcaataaaactaatggctgtgttaaacaaggtattcgtacagcccag
cctgatggccctccattgatgtcaatggagaacacttttcgtgatcaaaagaagttggaa
agcatccttggtaaaaggaacttctctggcatcagcaaatccaagaagggaaatctggag
aatgataaggttagcaaaaagcacccctcaggtaaaagagaacgttatgtgtgtagtgca
tgtggtcaggagggacacatgaggaccaacaagtactgtcctaggtatggagaagatatg
gacacacatgttgaaaactctggcatggagaggatatctgggaagcttaaccctcatgat
tcctctgcccaaccgaagtcttcaataaagaaaataatacctaaaaccgcttctagaaat
gttcctacagaagcctcagagaaaattgagaaaaccaaaaccttccaattgaaggtaaaa
tgtgggctccctgataatcctcgtgaccagatcagtgctgcaacacaaagttctgataaa
caagatgaaatggagagtagaattatctccaaatatagtaaaataacaatttccagcaag
atgaaatccgaggacttctatggtgaacctcagaagcaaccctcggttgtaattcaccca
ccttcggacatagaaaagtatcctcgaaggaaaattattatcaagcaactaaaggtggat
caggttaaagaagaagtccatgatgatattcaggaggagcatagaaaaactgagaaaatg
atgcagttaagttttgagatacttagaaagcaagaacagaagcggcttgctgatgagaca
gcagcaaaaagaaaagctaaagatgacaagaaattctgggaagaggaaaataaaagaagg
gagagggaaataattttgtgtcaagaacgagttatgcaattagagcaaaatcgattagct
gaggctaaaaggtaccgtgaagccttgcagcagagagaaaaggaggaactagagaggcag
aaaataataaaaaagaaaaagaaggtaaaactcgaggagacaggggatgattattatctt
gaggaaccaagaggatatcgaaccagccggagaatgccagaaaggagctgtgctgcaaag
aagcggcctgctgtcgactcgtttgctcggtgtggtccagaatattgccagcaaactaag
cgccatagagggggtggaggacaggttgggttatcaaacgctcttgaagacattctggat
gggttaaagaattccgaggtttcataccttttccttaaaccagtgtcaaagaaggatgca
cccgattacttggacatcatagaacatccgatggacctctctaccatcagggacaaagtg
agaaggatggagtataaaaccagggaagaattccggcaggatgtttggcaaattacctac
aatgcccacatgtacaacaataaccgtaacccaggtataccaccacttgcagatcagctg
ttacagctctgtgattatttcttggaccagtatgatgaaaggttaactgaagctgaagcc
gaagccggcatttaa
DBGET
integrated database retrieval system
