Papaver somniferum (opium poppy): 113287898
Help
Entry
113287898 CDS
T05758
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial-like isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03030
DNA replication
psom03410
Base excision repair
psom03420
Nucleotide excision repair
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113287898
03410 Base excision repair
113287898
03420 Nucleotide excision repair
113287898
03440 Homologous recombination
113287898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113287898
03400 DNA repair and recombination proteins [BR:
psom03400
]
113287898
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113287898
DNA replication proteins [BR:
psom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
113287898
DNA repair and recombination proteins [BR:
psom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
113287898
NER (nucleotide excision repair)
GGR (global genome repair) factors
113287898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
113287898
NCBI-ProteinID:
XP_026392557
LinkDB
All DBs
Position
6:complement(69618545..69625460)
Genome browser
AA seq
1128 aa
AA seq
DB search
MAAMGVSTHRNPFKPCFPPSFLFSSSKSFQRRDFHLLQGANSKSSRITILKSSLQFNRRL
SNCSRSFEEDRVRMIGVKQPYALPHYGNEGTHTCFHEQLELNSEDVPLSRSSDYGNPTGI
FTGVVESKNYPVPEKREKKKSWLDEINRMKLIRQEGAKGKAMQSSSRGDDVGIEKASISL
LETNGNGSSGTIRHSRLNNVTVNEAHSISYDRNAEISRYNRKLNQVQGASSFVQIERKNF
QSKELSEGKQRELHEPKLSELPIDRLKDTIAVGSSNGKRIAISNNVNETDTCLIKNGVEE
AIAINHDVNETYIQPLSDGEEAFAISNEVRETYDQPIKHGKEAASSSDLRENLGRIYDEV
LVVDNISTAKEIVKMLTTQEKYKNRIYGCDTEVCKIDVKTETPVDHGEVTCFSIYAGEGV
DFGNGKSCIWVDVLDGGGRDMMMEFAPFFEDPSIKKVWHNYSFDSHVIDNYGLKISGFHA
DTMHMARLWDSSRRLEGGYSLEALTSDPRVMNGNSKVSGSRQKKVEIMPGINQGKISMKT
IFGKGKLKKDGSEGKIIAIAPVEELQREERMLWICYSSLDSISTLKLYESLEKKLKAMEW
ILDGIEKGNMYDFYEEYWRPFGEILVNMETEGMLVNREALADMEKLAIVHQQVAGDKFRQ
WASKMCPDALYMNIGSDTQLRQLFFGGMTISSKDGSQTLDEEKEFKVPNVDKVIEEGKKV
ATKFRKITLHKIGNEIKAEIFTPTGRPSVSGDVLKVLAGRVTSEYKEDIDVSQYGTAYEA
FGEGKDGREACHAIAALCEVCAIDSLISNFILPLQSSAISGKDGRIHCSLNINTETGRLS
ARRPNLQNQPALEKDIYKIRQAFVAGDNNSLIVADYGQLELRILAHLADCKSMLDAFKAG
GDFHSRTAINMYPHIRKAVEQNEVLLEWYPQPGEEKPPVQLLKDKFASERRKAKMLNFSI
AYGKTPQGLAKDWKVTVKEATETVNLWYKQRQEVLAWQEERKKEAKKEGCVKTLLGRARC
FPSMSSASYGVKRHIERAAINTPVQGSAADVAMCAMLEIVKNARLKELGWRLLLQVHDEV
ILEGPTGSAEEAKAIVVNCMSKPFDGKNFLKVDLSVDAKVAKNWYAAK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatgggggtttcaactcacaggaacccttttaagccatgttttcctccttcc
ttcttgttttcttcttctaaatctttccagaggagggattttcatcttctccagggtgca
aacagtaagtcttcaagaattacaatcttgaaaagttctttacagttcaatagaagattg
agtaactgcagtaggtctttcgaagaagatcgtgtacgcatgattggtgtaaaacaacct
tatgctttgcctcattatgggaatgaaggaacccatacatgcttccatgagcaattggag
ttgaattcagaggacgttccactctctagatccagtgattacggtaatcctacaggtatc
tttactggagttgttgaaagcaaaaattatccagttcctgaaaaaagagaaaagaaaaag
tcctggttagatgaaataaacagaatgaagcttatcagacaggaaggtgctaaaggtaaa
gctatgcaaagctcttcaagaggtgatgatgtaggaattgaaaaagcttctatctcatta
ctggagacaaatggcaatgggtcgtctggtaccatcagacatagtcgtttgaataatgta
acggttaatgaggcacactcgataagctatgacaggaatgctgagattagtcgctataac
cgtaaacttaatcaggtacaaggagcatcttcttttgtacaaattgagaggaaaaatttc
cagtcaaaggagttatcagaaggaaagcaacgtgaattgcatgaacctaagctctcagag
ttacctatagatagacttaaagatacaattgcagttggttcatccaatggaaaaagaatc
gcaatctccaataatgtgaatgaaactgacacttgcctgataaagaatggagtagaagaa
gccatcgccatcaaccatgatgtgaatgaaacttacattcaaccgttatctgatggagaa
gaagctttcgccatctccaatgaggtgcgtgaaacttacgatcaaccgataaaacatggg
aaagaagcggctagttcgtcagatttgcgagaaaatcttggtcgaatatacgatgaagtt
cttgtagttgacaatatctcaacagcaaaggaaattgttaaaatgcttacaacgcaggaa
aagtacaaaaaccgaatctatggttgtgatactgaggtatgcaagattgatgttaaaaca
gagacccctgtcgatcacggggaggtgacatgttttagtatttacgccggagaaggtgtg
gattttggtaatgggaagtcttgtatttgggtggatgttctagatggtggcggtagggat
atgatgatggaatttgctcctttcttcgaagacccatcgattaagaaggtctggcataat
tatagctttgatagtcatgtaatagataattatgggcttaaaatttctggatttcatgct
gacactatgcatatggcacggctttgggattcctctagacgtttagagggtgggtactct
cttgaagcacttacaagtgacccaagagtcatgaatggaaacagcaaagtatcagggagc
cggcaaaagaaagtggagatcatgcctgggatcaatcaggggaaaatatcaatgaagacc
atttttggcaagggtaagttaaaaaaagatggctccgagggtaaaattattgccattgct
cctgttgaagagcttcaaagggaagagaggatgctgtggatctgttattcttccttagat
tcaataagcaccctgaagctgtatgaaagcttggaaaaaaagttaaaggcaatggagtgg
attcttgatgggattgaaaaaggaaatatgtacgacttctacgaggaatactggagacca
tttggtgagattttagtgaatatggaaacagagggaatgcttgtaaatcgagaagctctt
gcagacatggagaagctggctattgtacatcagcaagttgctggagataaatttcgccag
tgggcatctaagatgtgtcctgacgctttatacatgaacataggaagtgatacacaactg
cgacaactgttttttggtggaatgacaatcagcagtaaggatggatctcaaactctcgat
gaagagaaagaatttaaagtgcccaacgttgataaagtgatagaagaaggcaagaaggtt
gccacaaaatttcgcaagattacacttcacaaaattggcaatgagataaaagctgagata
ttcacacccactggccgcccgtctgtcagtggagatgtcctaaaagtacttgcaggcagg
gtcacttcggaatataaagaggacatagatgtctctcaatatggcacggcttacgaagca
tttggagagggcaaggatggaagagaagcctgtcatgccatagctgctttatgtgaagtc
tgcgcaattgactcgttgatatctaacttcattctgcccttgcagagcagcgccatatct
ggcaaagatggtcgtatccactgttctttgaatattaacactgagactggaaggttatcc
gctcggagaccaaatttacagaatcagcctgctttggagaaggacatatacaagatccgt
caggcatttgtagctggggataataattccctcattgttgctgactatggtcagttggag
ctcagaattcttgcgcatcttgctgactgtaagagcatgctggacgccttcaaagctgga
ggagatttccattcgaggacagctattaatatgtacccacatatacgtaaagctgtggag
caaaacgaagttctgctcgagtggtatcctcagcctggtgaagaaaaacctcctgtgcaa
ctattaaaggataagtttgcatctgaaagaagaaaggccaaaatgctcaacttttccatt
gcatatggcaaaactccgcaaggattggcaaaggactggaaggtcacagttaaggaagct
actgaaactgttaatctgtggtataaacaaaggcaagaagttttagcgtggcaggaagaa
cgcaagaaagaggctaaaaaagaaggttgtgtgaaaacattgttaggtcgtgctcgttgc
ttcccttctatgagttcagctagttatggtgttaaacgtcatatcgagcgagcagctatt
aatacccctgtgcagggtagtgctgctgatgtagctatgtgtgccatgctagaaatagtg
aagaatgctcgtttgaaggaacttggttggaggttgcttttgcaggttcatgatgaggta
atattggaaggtccgacagggtcagcagaggaagccaaggccattgttgtgaactgtatg
tccaaacccttcgatggaaaaaactttctcaaagtggatctgtctgtagatgcgaaggtt
gcaaagaattggtatgctgctaagtaa
DBGET
integrated database retrieval system
