Papaver somniferum (opium poppy): 113299799
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Entry
113299799 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113299799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113299799
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113299799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
113299799
NCBI-ProteinID:
XP_026404674
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All DBs
Position
7:complement(230903799..230912403)
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AA seq
1196 aa
AA seq
DB search
MNRQKSILSYMQKKQEDQKSTIPSNANNVPYQSQKQNQTRFEQFGMAKNHLEDDIIVVGT
DTPPEKLPRKILPSNFKANPTDAAGAAGSSLFSSILHKFSREGHEKPNQRNQGDCGLFNS
SSKISRNDEGLFKQQTPVKNSQTTSIEAKISDNNYGLGDLSDCGILDDFFGPETPANTRP
LVPRFKRVQQDFMGFNDDDDNMKSKRVKLIEEESVNENKKSTMKTFEANISKFEWLNNKN
VSDFSDLKTKGVNLFEEEPVSESRKSTMKTFEANKSNFEWLNDKNVSPIPNLKSKRVKFL
EEEPANGSKKSTTKTFEANTSKFEWLNSSSIRDASGRRPSDPLYDKRTLYIPPDDMKKMS
ASQKQYWGVKCQYMDVLLFYKVGQFYELYELDAEIAHKELDWKLTFSGVGKCRQVGISEA
GIDEAVRTLIGRGFKVGRVEQIETSEQAKARGRTAIIERKLVQVVTPATTIDGNIGPDAV
HLLALTEEQCDTENGLIVYGFAFVDCASLKFWVGSITDDASCAALGALLMQVAPKEVIYQ
STGISKEAQKALNKYSSAGSAKLQLTPSPSDSDFIDASKVRQMIHFKGYFRASLNSWGSA
LDGVIHRDITISALGGLVCHLSRLKLHDVLSNGEILPYQVYKGCLRMDGQTLVNLEIFTN
NVDGGSTGTLYKYLDNCVTSSGKRLLRSWICHPLKDVGEINNRLNVVEELMTHSDITLVV
TQCLRKLPDLERLLGRVKAIVRSSASLLLPLLGTKLLKRRIKAFGSLVKGLRIGLDLLMI
LQQKERDISALLNYLVVPPLCGSNGLDGHLTQFEAAVDSDFPKFQDHQVSDCNAETLAVL
IELFVKKAILWSQVIDALSCIDVLRSFAVTANSSSGSMCRPVLLPVNSGPMVSCQERGPT
LSIKGLWHPYAFGETVGEVIPNDLHLGEDADRSFPRTLLLTGPNMGGKSTLLRSTCLAVI
LAQLGCFVPGETCILSPVDTIFTRLGATDRIMTGESTFFIECMETASVLRNATDDSLVIL
DELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHSLTKEFSSHPHVSLQHMACSFK
PSTSKSMFKADQELVFLYRLTSGACPESYGLQVALMAGIPEKLVRAASKAGQVMKASVAE
NFKSSEQRASFSTLHEQWLKTVLALAKGAEEECSSDEDSWDTLLCLWLEMKSLYKD
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacagaaatctattctttcatacatgcaaaagaaacaagaagaccagaaatct
acgattccttccaacgctaacaatgttccttatcagtcccaaaagcaaaatcaaaccaga
tttgaacaatttggtatggcgaaaaatcatctagaagatgatattatagtggtaggaact
gatactccaccagagaagttgcctcgtaagattctcccttcaaactttaaagctaatcct
actgatgccgccggtgctgctggatcttctttgttttcaagtatattgcacaaattttca
agggaaggtcatgaaaaaccgaatcaaaggaaccaaggtgattgtggtttatttaatagt
tcatcgaaaattagcagaaatgatgagggattatttaaacaacaaacacctgtgaagaac
tcacaaacaactagtattgaagccaagatcagtgataataattatggtttgggcgatctt
tcagactgtggaattttggatgatttttttggcccggaaacaccagctaatacacgacct
cttgttcctcgtttcaaaagagttcaacaagattttatgggtttcaatgatgatgatgat
aatatgaaaagtaaaagagtgaagttaattgaagaagagtcagttaacgagaacaagaaa
tccacaatgaaaacatttgaagctaatatcagtaagtttgaatggcttaataataagaat
gtatctgatttttcggatttaaaaactaaaggagttaatttatttgaagaagaaccagtt
agtgagagcaggaaatccacgatgaaaacatttgaagctaataagagtaattttgaatgg
cttaatgataagaatgtttctccaattccgaatttgaaaagtaagagagtgaagttcctt
gaagaagaaccagctaatggaagcaagaaatccacaacaaagacatttgaagcgaatacg
agtaagtttgaatggcttaattcttcttcgattagagatgccagtgggagacgacctagc
gaccctctgtatgacaagaggacactttatataccccctgacgatatgaaaaagatgtct
gcatcacaaaaacagtattggggtgttaaatgtcaatatatggatgttctactcttctat
aaagtgggtcagttttatgagctatatgaattagacgccgaaattgcccataaggagctt
gactggaagcttacatttagtggtgtcgggaaatgcagacaggttggtatatctgaggct
ggaattgatgaggctgttcgtacgctgattggtcgtgggtttaaggttggacgagtagaa
cagatagagacatcagagcaagccaaagctagaggaagaactgcgattattgaaagaaaa
ctagttcaagttgtcacaccagcaactacaatagatggtaacattgggcctgatgctgtc
catttacttgcgttaacagaggagcaatgtgacaccgaaaatggtttgattgtatatgga
ttcgcttttgttgactgtgcttcgttaaagttttgggttggttccataacagatgatgct
tcctgtgcggctttgggggctttgttgatgcaagtggcacctaaggaggttatatatcaa
agcactgggatatctaaagaagctcaaaaagcactcaataagtattcatctgcaggatca
gctaagttgcaattgactccttcaccatcggactcagattttattgatgcttccaaggtc
aggcaaatgatacatttcaaggggtactttagagcgtctcttaattcctggggttctgca
cttgatggtgttattcaccgtgatataaccatctctgcgcttgggggacttgtttgccac
ttatccaggttaaagcttcatgatgttttgtccaatggagaaattttaccgtaccaagtc
tacaagggttgcctcaggatggatggacagaccctggtaaaccttgagattttcactaat
aatgtcgatggcggctccacaggtactctatataaatatcttgataactgtgtgacatca
tctggtaaacgacttctacggagctggatttgtcatccattaaaggacgtgggggagatc
aataacagacttaatgtagttgaggaactaatgacacattcagatataacacttgttgtc
actcaatgtttgcgcaagcttcctgacctagagagattacttggccgcgtgaaggctata
gtccggtcatcggcttctcttcttttacccttacttggaaccaaattactaaaacgacga
atcaaagcatttggctcacttgtgaaagggctgcggattggacttgaccttttaatgatc
ctacaacaaaaagaacgtgatatttcagcattgttaaattatctggttgtaccgccgtta
tgcggtagcaatgggcttgacggacaccttacccaatttgaagcagcagtggacagcgac
ttccccaaattccaggatcatcaagtttcagactgcaatgctgagactctcgctgttcta
attgaattatttgttaaaaaagctattttatggtctcaagtaattgatgctctcagctgc
attgatgtgctaagatcctttgcagtgactgcaaactcttcatctgggtctatgtgcaga
cctgttctgctgcctgtcaattctggacccatggtctcatgccaagagagaggacctaca
ctttcaatcaaagggctctggcatccatatgcttttggagaaacagtgggtgaagtaatt
ccaaatgacttgcatcttggggaggacgcagacagatctttccctcgtactttgctgttg
acaggtccaaacatgggcggaaaatcaaccttgctccgatcaacatgtttagcagtgatc
ttagcccagttaggctgctttgtgcctggtgagacatgcatattatcacctgtggatact
atcttcacacggcttggtgcaactgatcgtatcatgactggcgagagtaccttttttatt
gagtgtatggagacagcttctgttcttcgaaatgccactgatgattcccttgttattctc
gatgaactcggtcggggaacaagcaccttcgatggatatgcaatagcatatgctgtattt
cgccaccttgttgaaaaggtccactgtcgtttactctttgcaactcattaccattctctc
accaaggaattttcttcccatcctcatgtatcactccaacacatggcctgctcctttaaa
cccagtaccagcaaaagcatgtttaaagccgatcaagagttagttttcctttaccgtctc
acttctggagcatgtccagaaagttacggtttacaagtggctctaatggcagggatacca
gaaaagctagtcagagctgcatcaaaagctggtcaagtgatgaaagcatctgtcgcagaa
aacttcaagtcgagtgagcaaagggcttccttttcgacgcttcatgaacagtggctgaag
actgtattggctttagcaaaaggcgcagaagaagaatgtagttcggatgaagattcttgg
gatacattactttgtttgtggcttgagatgaagagcttatataaagactga
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