KEGG   Papaver somniferum (opium poppy): 113309711
Entry
113309711         CDS       T05758                                 
Name
(RefSeq) replication factor C subunit 1-like
  KO
K10754  replication factor C subunit 1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03030  DNA replication
psom03410  Base excision repair
psom03420  Nucleotide excision repair
psom03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113309711
   03410 Base excision repair
    113309711
   03420 Nucleotide excision repair
    113309711
   03430 Mismatch repair
    113309711
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psom03032]
    113309711
   03400 DNA repair and recombination proteins [BR:psom03400]
    113309711
DNA replication proteins [BR:psom03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113309711
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113309711
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_22 AAA_30 PTCB-BRCT Rad17 AAA_19 DNA_pol3_delta Gp44_lid BRCT_2 nSTAND3 RNA_helicase Sigma54_activ_2 AAA_assoc_2 Zeta_toxin AAA_24 NTPase_1 AAA_18 AAA_16 PHTB1_C AAA_14 RsgA_GTPase RuvB_N
Other DBs
NCBI-GeneID: 113309711
NCBI-ProteinID: XP_026414004
LinkDB
Position
9:complement(133343262..133351300)
AA seq 1000 aa
MGDIRKWFMKAHTKNDATTPAAKPPAADSPPVKPAAIIPHAEKSTNGGQESSGRKKTSRY
FATKPDKSKDEQQAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKEEKDSGSKPPPVKK
LLKAKEEDDNEDDDDDFEPSPAKKLKSTPRKGVKKSVEIDEDDDDDDEVGGTPRKPAGRG
SGGRSSAAAPGGGRGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPNCLLGKTFVISG
TLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLF
DLIRKSKPTKAPPEELKNNLGKGATLQPKGSPLKVVKGNEVSPSVEKKTPPKGSAQGVSP
AKRKTQVAGGSSLTWPEKYKPKTPNDILGNQTLVKQLHEWLSHWNDHFLHTKQQGKGKKQ
NDNGAKKAVLISGSPGIGKSTSAKLVSQMLGFQGIEVNASDSRGKADSKILKGIGGSMAN
SIKELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDRGGVADLIASIKISKIPIICICN
DRHSQKLKSLLNYCLLLNYRKPTKLQMAKRLMQVATTEGIKIDNEMALEELADRVNGDMR
MALNQLQYMSLSMSVIQYDDVRRRLLSSAKDEDISPFTAVDKLFDFNGGKLRMDERVDLC
MSDADLVPLLIQENYLNFRPSAVGKDENGIKRMNMIARAAESIGSGDIVNVQIRRYQQWQ
LFQTSSLVSSIIPAALLHGRRETFEQGERNFNRFGGWLGKNSTMGKNMRLLEDVHLHLLA
SRESISHRETLRVDYFPLIRIHLTDPLRSLDKDEAVQKVVEFMDAYSISQEDYDSIMELS
QFKKHPNPLEGIPPAVKGALTKAYKQGSSSRVIRSADLITLPGFKKAPKKRIAAMLEPVD
SGGLTEENGDTLAESEEENASDTEDTDGPDNGEKKLQLDLQSNSKKGIQVQLDLKNTGKS
SGKKAPASKSKAASASASAKKGSRNAGGSAAAASASKRKR
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgggggatatcaggaaatggttcatgaaagcacataccaagaatgatgcaacaacccct
gctgctaaaccccctgctgcagattcacctcctgttaaaccggctgcgattatcccacac
gcagaaaaatctacgaatggagggcaagagagctcaggaaggaagaaaactagtagatac
tttgctactaagccagataagtctaaagatgaacagcaggctgagaaaacagtagctaaa
agaaaaccccaagaaagttctaaggcattagacgaagatttaaagcctccacctgtgaag
aagcttcacaaggctaaagaagaaaaagatagtggttctaaacctccacctgtgaagaag
cttctcaaggctaaagaagaagatgataatgaagatgatgatgatgactttgagcctagt
cctgccaaaaaattgaagagtacccctcgtaaaggagtaaagaaatctgttgaaatagat
gaggacgatgatgatgatgatgaagtgggtggtactcctcgcaaaccagctggaagaggt
agtggtggaagaagttcagcagcagcccctggtggtggaagagggagagggagaggtggt
ggtggaagaggtgggttcatgaattttggtgaaaggaaagaccctccccacaaaggagaa
aaggaagtcccagagggtgcgcctaattgtttacttggtaaaacttttgttattagtggc
acccttgacagtttggaacgggaggaagcagaagacttgattaagcgccatggaggtcga
gttactgggtctgtcagtaaaaaaacgaattatcttcttgctgatgaagatattggggga
cgaaaatcagaaaaagctaaagaactgggcactgcatttttaactgaagatgggttgttc
gacctcattcgcaaatcaaaacccacgaaagcacccccagaagaattaaaaaacaattta
ggcaagggtgccaccttgcaaccaaaaggaagtcctctgaaagtagtaaaaggtaacgaa
gtctcgccctctgttgaaaagaaaacccccccaaaaggttcggctcaaggcgtttctcct
gctaaacgtaaaacccaagttgcgggtggttcctcattaacatggccagaaaaatacaaa
ccgaagactcccaatgatatcttgggcaaccagacacttgttaagcagcttcacgagtgg
ttgtcccattggaatgatcactttctacatactaagcagcagggaaagggaaaaaaacag
aatgacaatggagctaaaaaagctgttttgataagtggatcacctggcattggaaagagt
acatcagcaaaactggttagccagatgcttggcttccagggcatagaggtcaatgctagt
gacagccggggaaaagctgactcgaaaattcttaaaggaattggtggaagcatggcaaac
tctataaaagaacttgtcagcaatgaatctttgagtgttaagatggaacggtcaaaacat
caaaagactgtgttgattatggatgaagttgatggcatgtcctccggagataggggtggg
gtggctgaccttattgccagcatcaaaatttccaaaatcccgatcatctgtatttgcaat
gaccgtcatagtcagaaactgaaaagtcttctcaactactgtttgcttctcaactacaga
aaaccaacaaaactacagatggcaaagaggttaatgcaagttgcaactacagaaggcatc
aagattgataatgagatggctcttgaggaacttgcggatagagttaatggagatatgcgt
atggcacttaatcagttgcagtacatgagcctctcaatgtctgttatccaatatgatgat
gtgcggcgacgccttcttagtagtgcgaaggatgaggatatttcgccgtttactgctgtt
gacaagctgtttgattttaatggtggaaaattgagaatggatgagagggttgacttgtgc
atgagcgacgctgaccttgttcctcttctaatacaggaaaactaccttaattttcgacca
agtgctgttggtaaggatgagaatggaattaagagaatgaacatgattgcgcgtgcggca
gaatctattggaagtggagacattgttaatgtacagattcggagataccaacagtggcag
ctctttcaaactagttcccttgtgtcaagtataatacctgctgctttgctgcatgggcga
agggagacctttgaacagggggagcgcaatttcaatagatttggagggtggctggggaaa
aactcgacaatgggaaagaatatgaggcttttggaggatgtgcatcttcatcttcttgct
tctcgagaatccatttcacacagggaaaccttacgagtagattacttccctcttattcgg
atacacttaactgatcctcttagatcgctggataaggatgaagcagttcagaaggttgtg
gaattcatggatgcttactcaataagtcaggaggactatgactcaatcatggagttatca
caattcaagaagcacccaaatccactcgagggaataccgccagctgttaaaggtgcactg
acaaaggcatataagcaaggaagcagctcgcgtgttatacgatcagccgatttaattacg
cttccaggatttaagaaggctccaaagaaacgtattgcagcgatgttggagccagttgat
agtggtggtctgacagaagagaatggtgacacactagcagaaagtgaagaagaaaatgct
tcagatactgaagacacagatggacctgataatggtgagaaaaagctgcagctggatctc
caaagtaatagcaagaaaggaatccaagtacagcttgatttaaagaacactggtaagtca
agtggaaagaaagctcctgctagcaaatcaaaagcagcatctgcttctgcatctgcaaag
aaaggtagtcgtaatgctggtggtagtgctgcagctgcttctgcgtccaagagaaagaga
tga

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