Papaver somniferum (opium poppy): 113309711
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Entry
113309711 CDS
T05758
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03030
DNA replication
psom03410
Base excision repair
psom03420
Nucleotide excision repair
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113309711
03410 Base excision repair
113309711
03420 Nucleotide excision repair
113309711
03430 Mismatch repair
113309711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113309711
03400 DNA repair and recombination proteins [BR:
psom03400
]
113309711
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113309711
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113309711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_30
PTCB-BRCT
Rad17
AAA_19
DNA_pol3_delta
Gp44_lid
BRCT_2
nSTAND3
RNA_helicase
Sigma54_activ_2
AAA_assoc_2
Zeta_toxin
AAA_24
NTPase_1
AAA_18
AAA_16
PHTB1_C
AAA_14
RsgA_GTPase
RuvB_N
Motif
Other DBs
NCBI-GeneID:
113309711
NCBI-ProteinID:
XP_026414004
LinkDB
All DBs
Position
9:complement(133343262..133351300)
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AA seq
1000 aa
AA seq
DB search
MGDIRKWFMKAHTKNDATTPAAKPPAADSPPVKPAAIIPHAEKSTNGGQESSGRKKTSRY
FATKPDKSKDEQQAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKEEKDSGSKPPPVKK
LLKAKEEDDNEDDDDDFEPSPAKKLKSTPRKGVKKSVEIDEDDDDDDEVGGTPRKPAGRG
SGGRSSAAAPGGGRGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPNCLLGKTFVISG
TLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLF
DLIRKSKPTKAPPEELKNNLGKGATLQPKGSPLKVVKGNEVSPSVEKKTPPKGSAQGVSP
AKRKTQVAGGSSLTWPEKYKPKTPNDILGNQTLVKQLHEWLSHWNDHFLHTKQQGKGKKQ
NDNGAKKAVLISGSPGIGKSTSAKLVSQMLGFQGIEVNASDSRGKADSKILKGIGGSMAN
SIKELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDRGGVADLIASIKISKIPIICICN
DRHSQKLKSLLNYCLLLNYRKPTKLQMAKRLMQVATTEGIKIDNEMALEELADRVNGDMR
MALNQLQYMSLSMSVIQYDDVRRRLLSSAKDEDISPFTAVDKLFDFNGGKLRMDERVDLC
MSDADLVPLLIQENYLNFRPSAVGKDENGIKRMNMIARAAESIGSGDIVNVQIRRYQQWQ
LFQTSSLVSSIIPAALLHGRRETFEQGERNFNRFGGWLGKNSTMGKNMRLLEDVHLHLLA
SRESISHRETLRVDYFPLIRIHLTDPLRSLDKDEAVQKVVEFMDAYSISQEDYDSIMELS
QFKKHPNPLEGIPPAVKGALTKAYKQGSSSRVIRSADLITLPGFKKAPKKRIAAMLEPVD
SGGLTEENGDTLAESEEENASDTEDTDGPDNGEKKLQLDLQSNSKKGIQVQLDLKNTGKS
SGKKAPASKSKAASASASAKKGSRNAGGSAAAASASKRKR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgggggatatcaggaaatggttcatgaaagcacataccaagaatgatgcaacaacccct
gctgctaaaccccctgctgcagattcacctcctgttaaaccggctgcgattatcccacac
gcagaaaaatctacgaatggagggcaagagagctcaggaaggaagaaaactagtagatac
tttgctactaagccagataagtctaaagatgaacagcaggctgagaaaacagtagctaaa
agaaaaccccaagaaagttctaaggcattagacgaagatttaaagcctccacctgtgaag
aagcttcacaaggctaaagaagaaaaagatagtggttctaaacctccacctgtgaagaag
cttctcaaggctaaagaagaagatgataatgaagatgatgatgatgactttgagcctagt
cctgccaaaaaattgaagagtacccctcgtaaaggagtaaagaaatctgttgaaatagat
gaggacgatgatgatgatgatgaagtgggtggtactcctcgcaaaccagctggaagaggt
agtggtggaagaagttcagcagcagcccctggtggtggaagagggagagggagaggtggt
ggtggaagaggtgggttcatgaattttggtgaaaggaaagaccctccccacaaaggagaa
aaggaagtcccagagggtgcgcctaattgtttacttggtaaaacttttgttattagtggc
acccttgacagtttggaacgggaggaagcagaagacttgattaagcgccatggaggtcga
gttactgggtctgtcagtaaaaaaacgaattatcttcttgctgatgaagatattggggga
cgaaaatcagaaaaagctaaagaactgggcactgcatttttaactgaagatgggttgttc
gacctcattcgcaaatcaaaacccacgaaagcacccccagaagaattaaaaaacaattta
ggcaagggtgccaccttgcaaccaaaaggaagtcctctgaaagtagtaaaaggtaacgaa
gtctcgccctctgttgaaaagaaaacccccccaaaaggttcggctcaaggcgtttctcct
gctaaacgtaaaacccaagttgcgggtggttcctcattaacatggccagaaaaatacaaa
ccgaagactcccaatgatatcttgggcaaccagacacttgttaagcagcttcacgagtgg
ttgtcccattggaatgatcactttctacatactaagcagcagggaaagggaaaaaaacag
aatgacaatggagctaaaaaagctgttttgataagtggatcacctggcattggaaagagt
acatcagcaaaactggttagccagatgcttggcttccagggcatagaggtcaatgctagt
gacagccggggaaaagctgactcgaaaattcttaaaggaattggtggaagcatggcaaac
tctataaaagaacttgtcagcaatgaatctttgagtgttaagatggaacggtcaaaacat
caaaagactgtgttgattatggatgaagttgatggcatgtcctccggagataggggtggg
gtggctgaccttattgccagcatcaaaatttccaaaatcccgatcatctgtatttgcaat
gaccgtcatagtcagaaactgaaaagtcttctcaactactgtttgcttctcaactacaga
aaaccaacaaaactacagatggcaaagaggttaatgcaagttgcaactacagaaggcatc
aagattgataatgagatggctcttgaggaacttgcggatagagttaatggagatatgcgt
atggcacttaatcagttgcagtacatgagcctctcaatgtctgttatccaatatgatgat
gtgcggcgacgccttcttagtagtgcgaaggatgaggatatttcgccgtttactgctgtt
gacaagctgtttgattttaatggtggaaaattgagaatggatgagagggttgacttgtgc
atgagcgacgctgaccttgttcctcttctaatacaggaaaactaccttaattttcgacca
agtgctgttggtaaggatgagaatggaattaagagaatgaacatgattgcgcgtgcggca
gaatctattggaagtggagacattgttaatgtacagattcggagataccaacagtggcag
ctctttcaaactagttcccttgtgtcaagtataatacctgctgctttgctgcatgggcga
agggagacctttgaacagggggagcgcaatttcaatagatttggagggtggctggggaaa
aactcgacaatgggaaagaatatgaggcttttggaggatgtgcatcttcatcttcttgct
tctcgagaatccatttcacacagggaaaccttacgagtagattacttccctcttattcgg
atacacttaactgatcctcttagatcgctggataaggatgaagcagttcagaaggttgtg
gaattcatggatgcttactcaataagtcaggaggactatgactcaatcatggagttatca
caattcaagaagcacccaaatccactcgagggaataccgccagctgttaaaggtgcactg
acaaaggcatataagcaaggaagcagctcgcgtgttatacgatcagccgatttaattacg
cttccaggatttaagaaggctccaaagaaacgtattgcagcgatgttggagccagttgat
agtggtggtctgacagaagagaatggtgacacactagcagaaagtgaagaagaaaatgct
tcagatactgaagacacagatggacctgataatggtgagaaaaagctgcagctggatctc
caaagtaatagcaagaaaggaatccaagtacagcttgatttaaagaacactggtaagtca
agtggaaagaaagctcctgctagcaaatcaaaagcagcatctgcttctgcatctgcaaag
aaaggtagtcgtaatgctggtggtagtgctgcagctgcttctgcgtccaagagaaagaga
tga
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