Papaver somniferum (opium poppy): 113314034
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Entry
113314034 CDS
T05758
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00450
Selenocompound metabolism
psom00970
Aminoacyl-tRNA biosynthesis
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
113314034
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113314034
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psom01007
]
113314034
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113314034
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
113314034
Amino acid related enzymes [BR:
psom01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113314034
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
113314034
Prokaryotic type
Other AARSs
113314034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
C1_1
Motif
Other DBs
NCBI-GeneID:
113314034
NCBI-ProteinID:
XP_026418594
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All DBs
Position
9:complement(166626974..166632902)
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AA seq
803 aa
AA seq
DB search
MGDLQDMKKSPKLPIPGRRNIMITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNA
IYMCGTDEYGTATETKAMEEGCTPKEICYKYHAIHRDVYNWFDISFDEFGRTSSPQQTEV
CQAIFKKLMENNWLSENTMQQLYCKTCKRFLADRLVEGTCPRPTCNYDSARGDQCEKCGN
LLNPTELQDPKCKVCRNTPEIRDTDHLFLELPLLKDKLEEYINNMSVAGSWSQNAIQATN
AWLKEGLRSRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSDWEKWWKNP
ENVELYQFMGKDNVPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGIGVF
GNDAKDTKIPSEVWRYYLLTNRPEVSDTLFTWKDLQAKLNSELLANLGNFINRVLSFIAK
PSGLGYGSIIPDAANAESHSLTKALAEKVGKLVEQYVEAMEKVKLKQGLKTAMSISSEGN
CYLQDSQFWKLYKENPASCAIVMRTSVGLVYLLASLLEPFIPSFSVEVVKQLNLPSELPL
SLSDENGDISRARRPWEIIPSGHKIGVPEPLFKELKDEEVEFFSEKFAGSQADRKVKADE
ADAKKMADQLKKTKLSDAKKQKASKSAAQGKSGGAAETEITISRLDIRVGLITKVMRHPD
ADSLYVEEIDVGEATPRTVVSGLVKFIPIEEMENRKVCVLCNLKPATMRGIKSHAMVLAA
SNEHHSKVELVDPPSSAAVGERVTFPGFEGLPDEVLNPKKKVWETLQVDLETDAELVARY
KDIPLTTSAGVCKVLSISSGAIR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcttcaagatatgaaaaaatctccgaaactaccgatacctgggcgtaggaac
atcatgattaccagtgcattaccttacgtgaataacgttcctcatcttggaaatatcata
ggatgtgttttgagtgctgatgtattcgctcgttattgccgtctccgaggttataacgca
atttatatgtgtggaactgatgaatatggaaccgccactgaaaccaaagctatggaagaa
ggttgtacacctaaggagatttgttacaagtaccatgcaattcatagagatgtttacaac
tggtttgacataagttttgatgagtttggacgcacttctagtccccaacagactgaagtt
tgccaagcaattttcaagaaactgatggagaacaactggctttctgaaaatacaatgcag
cagctttactgcaaaacatgtaaacgtttcttagctgatcggctggtggaaggaacctgt
cctagacccacatgtaactatgattctgcacgaggtgaccagtgtgaaaaatgtggaaac
cttttgaatccaacggagctacaggatcccaagtgcaaggtatgccggaacactcctgaa
attcgtgatacagaccacttgtttctagaactccccttgctgaaggataaattggaagag
tacattaacaatatgtccgtggctggatcgtggagccagaatgcaattcaagctacaaat
gcatggctaaaagagggcctgagatctaggtgtataaccagagatcttaagtggggggtt
cctgttccacatgagaaatacaaggacaaggttttctatgtttggttcgacgcacctatt
ggctacgtctcgataacttcatgctacacttctgattgggagaagtggtggaagaatcca
gaaaatgtggagctttatcaatttatggggaaggacaatgtaccattccacactgtaatg
ttcccctcaactcttcttggaactgaagaaaactggacgctgatgaagactattagtgtt
acagaatatttaaattatgaagcagggaagttctctaagagtaaaggaataggtgttttt
ggtaatgacgcaaaagacacaaagatcccttcagaagtgtggagatactatctgctgaca
aataggcctgaagtatcagacactctgtttacatggaaggatttgcaagccaaacttaac
agcgagttgcttgctaacttgggcaatttcatcaatcgtgtcttgagcttcattgccaaa
ccttcaggtttaggttatggttctattatccctgatgctgcaaatgcagaatcacactcc
ttgacgaaggcgctggcagagaaagttggaaaacttgttgagcaatacgttgaagcaatg
gagaaggttaaactaaagcaaggcctgaaaactgcaatgagcatttcgagtgaaggaaat
tgctacctacaagatagccagttctggaaactatacaaggaaaatccagcttcttgtgcc
attgtcatgagaacttctgtagggctagtttatcttctagcatctcttttggaaccgttt
attccatctttttctgtagaggtagtaaagcaacttaatttaccttccgagcttccactc
tcacttagcgatgaaaacggagatataagtagggcaagaagaccttgggagattatacct
tctggccacaaaattggggtaccagagccactttttaaagaactgaaagatgaggaggtg
gagtttttcagcgagaagttcgctggaagtcaagctgacagaaaggtaaaggctgacgaa
gctgatgcaaaaaagatggctgaccaactcaagaaaaccaagctttctgatgcaaagaaa
caaaaggcatcaaaatctgcagctcagggaaaatctgggggagctgctgagacagaaatc
actatcagtagacttgacattcgtgttggtctcattactaaggtcatgagacatccagat
gctgattcgctgtatgttgaagagatcgatgtgggtgaagctacaccacgtactgttgtt
agtgggcttgtgaagttcatccccattgaagaaatggagaaccgaaaagtttgtgttctg
tgtaacctgaaaccagcaacaatgcgtggtattaagtctcatgctatggttcttgctgcc
tccaatgagcaccacagtaaggttgaattggtggatccaccaagctctgctgcagtggga
gagagagttaccttccctggttttgaaggtctgcctgatgaagtgctaaaccctaagaag
aaggtatgggaaacattacaagtagatctggagactgacgctgaactggtagctcgatac
aaagatattccattaactacgtcagctggggtttgcaaagtcttgtccatatcaagtgga
gccataaggtag
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