Papaver somniferum (opium poppy): 26895679
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Entry
26895679 CDS
T05758
Symbol
rpoB, AZ395_gp075
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
26895679 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
26895679 (rpoB)
03400 DNA repair and recombination proteins [BR:
psom03400
]
26895679 (rpoB)
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
26895679 (rpoB)
Transcription machinery [BR:
psom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
26895679 (rpoB)
DNA repair and recombination proteins [BR:
psom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
26895679 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-GeneID:
26895679
NCBI-ProteinID:
YP_009234974
UniProt:
A0A125R3B1
LinkDB
All DBs
Position
Pltd:complement(23599..26811)
Genome browser
AA seq
1070 aa
AA seq
DB search
MLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLMEELYKFPKIEDIDQEIEFQLFVETYQLV
EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQEQTIFIGNIPLMNSLGTFIVNGIYR
IVINQILQSPGIYYRSELDHNGISVYTATIISDWGGRSELEIDRKARIWARVSRKQKISI
LVLSSAMGSNLREILDNVCYPEIFLSFPNDKEKKKIGSKENAILEFYQQFACVGGDPVFS
ESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDVLAAADHLIGMKFGM
GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKFIPTPHNLVTSTP
LTTTYESFFGLHPLSHVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFFEIDERFKGVRVVYLSPSRDEYYMVS
AGNSLALNQGIQEEQVVPARYRQEYLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVSAIAEHEGKVVSTDTDKIVFSGN
GDTLSIPLVMYQRSNKNTCMHQKSQVQRGNCIKKGQILADGVATVGGELALGKNVLVAYM
PWEGYNFEDAVLISERLVYGDVYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNL
DRNGIVMLGSWVETGDILVGKLTPQMTKESSYAPEDRLLRAILGIQVSTAKETCLKLPIG
SRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMP
YLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLV
FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHG
RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
GTTIIGGTIPKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQIQRKEA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggatggaaatgagggaatgtctacaatacctgggtttagtcagatacaattt
gaggggttttgtaggttcattgatcagggcttgatggaagaactttataaatttccaaaa
atagaagatatagatcaagaaattgaatttcaattatttgtggaaacttatcaattggta
gaacccttgataaaagaaagagatgctgtgtatgaatcactgacatattcttctgaatta
tatgtacctgcgggattaatttggaaaaccggtagggatatacaagaacaaaccatattt
attggaaacattcctctaatgaattccctgggaacctttatagtaaatggaatatacaga
attgtaatcaatcaaatattgcaaagcccaggtatttattaccgttcagaattggaccat
aacggaatttcggtctataccgccaccataatatccgattggggaggaagatcagaatta
gagattgatcgaaaagcaaggatatgggctcgtgtgagtcggaaacaaaaaatatctatt
ctagttctatcatcagctatgggttcgaatctaagagaaattctagataatgtttgctac
cctgaaattttcttgtctttcccgaacgataaggagaaaaaaaagattgggtcaaaagaa
aatgccattttggaattttatcaacagtttgcttgtgtcggcggggatcctgtattttct
gagtccttatgtaaggaattacaaaaaaaattttttcaacaaagatgtgaattaggaagg
attgggcgacgaaatatgaaccggagacttaatcttgatatacctcagaacaatacattt
ttgttaccacgagatgtattggcagcggcggatcatttgatcggaatgaaatttggaatg
ggtacacttgacgatatgaatcacttgaaaaataaacgtattcgctctgtagcggatctg
ttacaagaccaattcggattggctctggttcgtttagaaaatgtggttcgaggaactata
tgtggagcaattaggcataaatttatcccgactccccataatttagtaacatcaactcca
ttaacaaccacttatgaatcatttttcggtctacaccccttatctcatgttttggatcga
actaatccattgacacaaatagttcatgggcgaaaattgagttatttaggtcctggagga
ttgacaggtcgaactgctagttttcggatacgagatatccatcctagtcactatggacgt
atttgcccaattgacacatctgaaggaatcaacgttggacttattggatccttagctatt
catgctaggattggtcattgggggtctctcgaaagtccgttttttgaaattgatgagaga
ttcaaaggggtacgggtagtttatttatcgccaagcagagatgaatactatatggtgtcg
gcaggaaattctttggcgttgaatcagggcattcaagaagaacaggttgttccagctcga
taccgtcaagaatacctgactattgcatgggaacagattcatcttcgaagcatttttccc
ttccaatatttttctattggcgcttcccttattccttttatcgaacataatgacgcgaat
cgggctttaatgagttctaatatgcaacgtcaagcagttccgctttctcggtccgaaaag
tgcattgttggaactgggttggaacgccaagtagctctagattcaggagtttccgctata
gcggaacacgagggaaaagtcgtttctaccgatactgacaagatcgttttctcaggtaat
ggagacactctaagcattccattggttatgtatcaacgttccaacaaaaatacttgtatg
catcaaaaatcccaagttcaacggggtaactgcattaaaaagggacaaattttagcagat
ggtgttgctacagttggtggcgaactcgctttgggaaaaaacgtattagtagcttatatg
ccatgggaaggctacaattttgaagacgccgtacttattagtgaacgtctagtatatggc
gatgtttatacttcttttcatatacggaaatatgaaattcagactcatgtgacaagccaa
ggccctgaaaggatcactaatgaaataccgcatttagaagcccacttactccggaattta
gatagaaacggaattgtgatgctggggtcttgggtagaaacaggtgatattttagtaggt
aaattaacgcctcagatgacgaaagaatcatcatatgccccggaagatagattattacgg
gctatacttggcattcaagtatccactgcaaaggaaacttgtctaaaattacctataggt
agcagaggtcgagttattgatgtgagatggatccagaaaaaggggggttctagttataat
ccagaaatgattcgtgtatatatttcacagaaacgtgaaataaaagtaggggataaagtt
gctggaaggcatgggaataaaggtatcatttccaaaattttgcctagacaagatatgccg
tatttacaagacggaacgcctgttgatatggtcttcaatccattaggagtaccttcacga
atgaatgtaggacagatatttgaatgctcgctcgggttagcgggggatctgctagacagg
cattatcgaatagcaccctttgatgagagatatgagcaagaggcttctagaaaactcgtg
ttttctgaattatatgaagccagtaagcaaacagcgaatccgtgggtatttgaacccgag
tatccgggaaaaagcagaatatttgatggaagaacgggagatccttttgaacaacccgtt
ataataggaaaatcctatatcctaaaattaattcatcaagttgatgataaaattcatggg
cgttccagcgggcattatgcacttgttacacaacaaccccttaggggaagggctaagcaa
gggggccaacgggtaggagaaatggaagtttgggctttagaggggtttggcgttgctcac
attttacaagagatgcttacttataaatctgatcatattagagctcgtcaggaagtactt
ggtactacgatcattggaggaacaatacctaaacctgaggatgctccagaatcctttcga
ttgctcgttcgagaactacgatctttggctctggaattgaatcatttccttgtatctgag
aagaacttccagattcaaaggaaggaagcttga
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integrated database retrieval system
