KEGG   Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_4106Help
Entry
PSPPH_4106        CDS       T00266                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase B
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
psp  Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp00473  D-Alanine metabolism
psp00550  Peptidoglycan biosynthesis
psp01100  Metabolic pathways
psp01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:psp00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    PSPPH_4106 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PSPPH_4106 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    PSPPH_4106 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:psp01011]
    PSPPH_4106 (ddlB)
Enzymes [BR:psp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PSPPH_4106 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:psp01011]
 Precursor biosynthesis
  Amino acid ligase
   PSPPH_4106 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATP-grasp_3 TTL ATPgrasp_YheCD ATPgrasp_Ter ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID: AAZ35454
UniProt: Q48EG0
LinkDB All DBs
Position
complement(4691080..4692039)
Genome map
AA seq 319 aa AA seqDB search
MTAVTLSSLRSTLEPKSFGRVAVLFGGKSAERAVSLNSGNAVLKALLDAGVDAFGIDVGD
DFLQRLVSEKIDRAFIVLHGRGGEDGTMQGLLECLEIPYTGSGVLASALAMDKLRTKQVW
QSLGLATPLHAVLGNESDCICAATELGFPLIVKPAHEGSSIGMAKVNSVDELIAAWKAAS
TYDSQVLVEQWIQGPEFTVASLRGQVLPPIGLGTPHSFYDYDAKYLASDTQYRIPCGLGD
AQEQELKQLAARACDAIGIAGWARTDVMQDAQGKFWLLEVNTVPGMTDHSLVPMAARAAG
LDFQQLVLAILADSVQARG
NT seq 960 nt NT seq  +upstreamnt  +downstreamnt
atgacagccgtcaccctgtcttccctgcgctcgacactcgagccgaaaagcttcggtcgt
gtcgccgtgctctttggtggcaagagtgccgagcgtgcagtctccctgaactcgggtaat
gccgtgctcaaggcactgctcgatgctggcgtggatgcgttcggcattgatgtgggcgat
gacttcctgcagcgactggtcagtgaaaagatcgaccgtgccttcattgttctgcacggg
cgaggcggcgaagacggcaccatgcaaggcctgttggaatgcctggaaatcccttatacc
ggtagtggtgtactggcttccgcgctggcgatggacaagttgcgcaccaagcaggtctgg
cagagtctcggccttgcaacgcccttgcatgctgttcttggaaacgagagcgattgtatt
tgcgcagcgacggaactgggcttccctttgatcgtcaaaccggcccatgaaggttcaagt
atcggtatggcaaaggtgaacagcgtcgatgaattgatcgccgcctggaaagccgccagt
acctacgattcgcaagtattagttgaacagtggattcagggacctgagttcactgtggcg
tctctgcgtggccaggtgttgcctcccattggcctgggcactcctcacagtttttatgat
tacgatgccaagtacctggcgtccgatactcagtaccggatcccttgcgggcttggcgat
gcgcaggaacaggaactcaaacaacttgcagcacgcgcttgcgacgccatcggtattgca
gggtgggcgcgcacggatgtcatgcaggacgcacaaggcaagttctggttactggaagtg
aataccgtgcccggcatgaccgatcacagtctggtgccaatggctgcgcgtgctgcaggt
ctggattttcaacaactggtgttggcgattctggccgacagtgttcaggcgagagggtaa

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