Pseudohongiella spirulinae: PS2015_285
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Entry
PS2015_285 CDS
T04158
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pspi
Pseudohongiella spirulinae
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspi03021
]
PS2015_285
Transcription machinery [BR:
pspi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PS2015_285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_16
DUF6434
Motif
Other DBs
NCBI-ProteinID:
ALO44977
UniProt:
A0A0S2K9F6
LinkDB
All DBs
Position
263502..264023
Genome browser
AA seq
173 aa
AA seq
DB search
MSKVIDAVVARAMRGDRQAFFRIYQEHIGRVYAICWRLLGDRQRAEDAAQEIFIKVWEHL
PRFKGDSSFMTWLRSIATRTAIDHWRREQRLQFVDSGVEETEIGSIPAMDAENHDLEQAI
QRLPSQARAVFILFALEGYQHSEIAELLGIAEGSSKAQYHRARTLLRGFLGEQ
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtgatcgatgccgttgtcgctcgtgccatgcgcggcgaccggcaggccttt
ttcaggatctatcaggagcatatcggacgtgtctacgcgatatgctggcgcctgctggga
gaccggcagcgggcagaggatgccgctcaggagatttttatcaaggtctgggagcacttg
ccgcgattcaagggtgacagcagctttatgacatggctgcgcagtatcgccacgcggacg
gccatcgatcactggcgtcgcgaacagagattgcagttcgttgactctggcgttgaagag
acagagatcggctcgattcccgcgatggatgcggaaaatcatgatctagaacaggcaatt
caacgattgccttcgcaggcgcgggcggtatttatactgtttgccctggaaggctatcaa
cacagcgaaatcgctgagttacttggcattgccgagggcagcagcaaagcacagtatcac
cgtgctcgaaccttgttgaggggatttttaggtgagcagtaa
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