Stutzerimonas stutzeri DSM 4166: PSTAA_3471
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Entry
PSTAA_3471 CDS
T01976
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psr03016
]
PSTAA_3471 (truB)
Enzymes [BR:
psr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSTAA_3471 (truB)
Transfer RNA biogenesis [BR:
psr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSTAA_3471 (truB)
Prokaryotic type
PSTAA_3471 (truB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
SF3b1
Motif
Other DBs
NCBI-ProteinID:
AEA85333
LinkDB
All DBs
Position
complement(3679770..3680687)
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AA seq
305 aa
AA seq
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MAQVKRVRRDVSGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKAYETVMQLGVTTTTADAEGEVLERKPVAVTREQLEALLPQFRGDIL
QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVNIARLELLALEGDKARLAVACSKGTYI
RTLVEDLGQQLGCGAHVAELRRTQAGPFDLSQTVTLETLERLHGEGGAEALDALLQPVDS
GLEHWPLLQLSEHSAYYWLHGQPVRAPEAPKYGMVRVQDNNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaagcgtgtacgtcgcgacgtcagcggcatcatcctgctcgacaagccg
cgcgggttcacctccaacgctgcgctgcagaaggttcgctggctgctcaatgctgaaaag
gccggccataccggcagcctcgatccattggcgacgggggtgttgccgctgtgtttcggc
gaggctaccaagttctcgcagtacctcctggatgcggacaaggcctacgaaacggtcatg
cagctcggcgtgaccactaccaccgccgatgccgaaggcgaggtgctggaacgcaagccg
gtcgcggtgacgcgcgagcagctggaggcgctgttgccgcagttccgtggcgacatcctg
caggtgccgccgatgtattcggcgctcaagcgcgacggccagccgctgtacaaactggcg
cgtgccggagaggtggtggagcgcgagccgcgttctgttaatattgcgcgcttggagttg
ctcgcgctcgaaggcgacaaggctcgcctggccgtcgcctgtagcaagggcacctatatc
cgcacgctggtcgaggatctaggccagcagcttggctgcggcgcgcatgtcgctgaactg
cgacgcacccaggccggtccgttcgacctgtcgcagacggtgacgctcgaaacgcttgag
cgtttgcatggcgaaggtggtgccgaggcgctggatgcccttctgcaaccggtggacagc
ggattggagcattggccgctgctgcagctttccgagcacagcgcctactactggctgcac
gggcaaccggtgcgggcaccggaggcaccgaagtatggcatggtgcgcgtgcaggacaac
aacggccgctttatcggtatcggtgaggtgagcgaagacgggcgtattgcgccgcgtcga
ctgattcggtcggaatga
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