Pelodiscus sinensis (Chinese soft-shelled turtle): 102449517
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Entry
102449517 CDS
T02980
Symbol
SMO
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102449517 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pss04030
]
102449517 (SMO)
G protein-coupled receptors [BR:
pss04030
]
Frizzled / Smoothened family
102449517 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Tetraspanin
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
102449517
NCBI-ProteinID:
XP_025038991
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MSRPCSEHLGTFSICLTIIFLLQLAAGVLGFVFSDKARGKVSEIINNAIVHYRDDLDLQN
LIDFGQKEFSCCGGVSYKDWSQNMYFNCTADNPSRERCSVPYSCCLHAADQPKYWTPPPH
ALRHSEKEKSGPPGEFQSFSTQDDNGANQSAFNLGVVFLCLLRGNLLTAVFPPRQFSICL
TIIFLLQLAAGVLGFVFSDKARGKVSEIINNAIVHYRDDLDLQNLIDFGQKEFSCCGGVS
YKDWSQNMYFNCTADNPSRERCSVPYSCCLHAADQAVINTMCGQGMQAMNYLEASEFIYP
NGCIDKLLLWPGLRNAPRCWDAIQPLLCAVYMPKCEDGQVELPSQTLCQATRGPCTIVER
ERGWPDFLKCTTDRFPEGCPNEVQNIKFNSSGHCEAPLVQTDNPKSWYEDVEGCGIQCQN
PLFTESEHRDMHVYIAAFSSVTIFCTFFTLATFVADWKNSNRYPAVILFYVNACFFVGSI
GWLAQFMDGARGEIVCRADXXXXXXXPSSNETLSCVIIFVIVYYSLMSGVIWFVMLTYAW
HTSFKALGTTYQPLLGKTSYFHLVTWAIPFVLTVAILAVAQVDGDSVSGICFVGYKNYRY
RAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGKRGPGG
PGLWGTAGVHGKLCGAREVGAAGVHEDPRGVEGARAMLFIHTNKPIPNCEIKNRPSLLVE
KINLFAMFGTGISMSTWVWTKATLLIWKRTWCRLTGQSDDEPKRIKKSKMIAKAFSRRKE
LLHNPEQELSPLNESRFVQRRQQFLLAVPPLRWEPDSRPAPGLAFDLNEPSADVSSAWAQ
HVTKMVARRGAILPQDISVTPVATPGEPLGKRGEAKVTGLPRGSAAAHFCGRPLASWGHR
EVSVIGTPFWGVRLSPLARDRPCSLAAGSWETEAGSRKKKRRKKKEAGPPGPAPQLCDVG
SLAPQARSAVPRLPKLPRQKCLVSSPWEARLWSPPPAASLAPGALPGGSVPCGLRTPGRR
AGFAPVHSQTNLMDAELLDADSDF
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcccgtgctctgagcacttggggacgttctcaatctgcttgaccatcatcttc
ctgctgcagctggcagctggagtactgggctttgtcttctcggataaggcacgcgggaag
gtgagcgagatcatcaacaacgccatcgtgcattaccgggacgacctggacctgcagaac
ctcatcgacttcggccagaaggagttcagttgctgtgggggtgtctcctacaaggactgg
tcccaaaacatgtatttcaactgcactgctgacaaccccagccgggagcgctgttccgtg
ccttattcttgctgcctgcacgctgccgaccagccaaaatattggactcctccgccacat
gccctgcgccattcagaaaaagagaagtcaggaccacctggggaattccagagcttcagt
acccaggacgataatggagcaaaccaatcagccttcaatttgggtgttgtctttctttgc
ctcctccgtggcaatttgctgaccgctgttttccctccccggcagttctcaatctgcttg
accatcatcttcctgctgcagctggcagctggagtactgggctttgtcttctcggataag
gcacgcgggaaggtgagcgagatcatcaacaacgccatcgtgcattaccgggacgacctg
gacctgcagaacctcatcgacttcggccagaaggagttcagttgctgtgggggtgtctcc
tacaaggactggtcccaaaacatgtatttcaactgcactgctgacaaccccagccgggag
cgctgttccgtgccttattcttgctgcctgcacgctgccgaccaggccgtcatcaacacc
atgtgtggccagggcatgcaagccatgaactacctggaggccagcgagttcatctacccc
aacggctgcatcgacaagctgctgctctggccaggcttgcggaacgccccgcgctgctgg
gacgccatccagccgctgctctgcgccgtgtacatgcccaagtgcgaggacggccaggtg
gagctgcccagccagaccttgtgccaggccacccggggcccgtgcaccatcgtggaacgg
gagcggggctggcccgacttcctcaagtgcaccacggaccgctttccggaaggctgcccg
aacgaggtgcagaacatcaaattcaacagctcggggcactgcgaggcgcccctggtgcag
acggacaaccccaagagctggtacgaggacgtggagggctgcggcatccagtgccagaac
cccctcttcacggagagcgagcaccgggacatgcacgtgtacatcgccgccttcagctcc
gtcaccatcttctgcaccttcttcaccctggccacgttcgttgccgactggaagaactcg
aaccgttacccggccgtcatcctcttctacgtcaacgcctgcttctttgtgggcagcatt
ggctggctggcgcagttcatggacggggcccgcggcgagatcgtgtgccgagccgacnnn
nnnnnnnnnnnnnnnntccccagctccaacgagacgctctcctgcgtgatcatcttcgtc
atcgtctactactcgctgatgtcgggcgtgatctggttcgtcatgctgacctacgcctgg
cacacctcgttcaaggccctgggcaccacctaccagccgctgctgggcaagacctcctac
ttccacctggtcacctgggccatccctttcgtcctcaccgtcgccatcctggctgtcgcc
caggtggatggagactccgtcagcggcatctgctttgtgggctacaagaactatcgctac
cgggccggcttcgtcctggcgcccatcggcctggtgctgatcgtgggaggctacttcctc
atccgaggcgtcatgacgttgttctccatcaaaagtaaccaccccggcctgctgagcgag
aaggcggccagcaaaatcaacgagaccatgttacggctgggtaagcggggcccgggcggg
cctggcttgtgggggaccgctggtgtccatgggaagctctgtggtgcgcgagaagtgggt
gccgctggtgttcacgaggaccctagaggtgtcgaaggagcccgagctatgcttttcatc
cacaccaacaagcccatccccaactgcgagatcaagaaccggcccagcctgctggtggag
aagatcaacctcttcgccatgttcggcaccggcatctccatgagcacctgggtgtggacc
aaagccaccctcctcatctggaagcgcacctggtgcaggctgacgggacagagcgatgac
gagcccaagaggatcaagaaaagcaagatgattgccaaggccttctcccggcggaaggag
ctgctgcacaacccggagcaggagctgtcccctcttaatgagagccgctttgtccagcga
cgacaacagtttttactcgctgttcctcctctccgctgggagccagattcaaggccggct
cctggtttggctttcgacctcaacgagccgtcagccgacgtgtcctcggcctgggcccag
cacgtcaccaagatggtggccaggagaggagccatcctgcctcaggacatctcggtcaca
cccgtggcgacgcctggtgagcctctgggaaagcgcggggaggcgaaggtgacaggcctg
ccacggggtagcgctgccgcgcacttctgcgggaggccattggcgtcctgggggcaccgg
gaggtttcggttatcgggacccctttttggggggtgcggctcagccccctagcaagagac
aggccctgcagcctagctgctggcagttgggaaaccgaggcaggaagccgcaagaagaag
aggaggaagaagaaagaggccggcccgcccgggcctgcgccccagctctgcgacgtgggc
tccttggccccgcaggcccgcagcgccgtcccacgcctgcccaagctgcccaggcagaag
tgcttggtctccagcccctgggaggctcggctttggtccccgccccccgccgccagcctg
gctcctggcgccctgcccggcgggagcgtcccctgcgggttgaggactccaggccgaagg
gcaggcttcgcccccgtccattcccagacgaacctcatggatgctgagctgctggatgcg
gattcggacttctag
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