Pelodiscus sinensis (Chinese soft-shelled turtle): 102452116
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Entry
102452116 CDS
T02980
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102452116 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102452116 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102452116 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
102452116
NCBI-ProteinID:
XP_014437002
Ensembl:
ENSPSIG00000017271
LinkDB
All DBs
Position
Unknown
AA seq
3169 aa
AA seq
DB search
MAGSLAAVQSAGEIRKGEGRGGFPWRGRAKRTRRSCSPEQTTCSVLPSHLSYRCRCLGRE
EMSGCCPCRWLLLASVLWGAGECQLRGLFPAILNLASHAHINTNATCGEKGPEMFCKLVE
HVPGRPLRNAQCRVCDHNSANPKEQHPISNAIDGTNNWWQSPSIQNGREYHWVTITLDLR
QVFQVAYVIIKAANAPRPGNWILERSVDGTEFKPWQYYAISDTECLTRYNVTPRLGPPTY
KRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQTLLEFTSARYIRLRLQRIRTL
NADLMTLSHHDPKDLDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDETTKKLQCQCEH
NTCGESCNECCPGYHQNPWRPGTISAGNKCEKCNCHNKAEDCYYSQSVADQNRSINIHGQ
FIGGGVCINCTQHTTGINCEICADGYYRPYKVSPYEDYPCHPCDCDPFGALSSDCIKDFD
HSDHQHGTQPGHCQCKEGYTGEKCDRCAFGYKGYPTCVHCNCSLVGSINDDPCTEPCLCK
ENVEGENCDRCKPGFYNLQERNPHGCTECFCFGVSDVCDSLAWPISQVSDMAGWLVTDLD
TKKSVEPQQGQFDGPHQISVNNTAAVKILKSTYYWSAPEPYLGNKLTAFGGYLKYTVSYD
IPMESVDSDMVSNVDVIIQGNGQILSTRSEGLSLQPYEEYSNTVKLMSENLIDFNTKKAI
DRDRLMTVLANVTHLLIRASYNIAKRAIYRLDSVTLDMASANAIDLSSATEVEHCECPQG
YTGISCESCLSGYYRVGGILFGGICQPCECHGHATECDIHGVCFACQHNTTGLSCDQCLP
GFYGNPSQGTPEDCQPCACPLKTDTNNFSPTCHMDNSGEVICDKCLPGYAGSRCERCANS
YYGNPLVSGESCVPCDCNGNIDPTEDGNCDALTGECLKCVGNTQGPHCEKCADGYYGDAV
IAKSCHVCECHVNSSLSNICHPETGLCHCKPNVIGPRCDTCLNGFYGLNTGLGCLPCNCS
QYGSVSEDCTDEGQCHCVPGVTGEKCDRCAHGFYAFQDGGCTPCDCAHTQNNCNEDSGQC
ICPPHAQGPKCELCEDNFWGLHLELGCKACNCSDVGSTSLQCDLQTGQCQCKDEFGGEDC
SRCALGYRDYPDCVSCDCDLSGTKADRCDENQGICSCEEESGICACKENVFGLHCSECKT
GTFALHASNPLGCTPCFCFGLSEICSELEEHVRIPVILTPEQSILHVVSQSNLTGTTEGV
FSQFSDVLLDAAIVRQHLKTEPFYWRLPGQFQGDQLMAYGGKLKYTVAFYALDGFGTSNF
EPQILIKGGHTSKLVIYVDISAPQNGVRSEEEVEMKEHVWKYFNSVSDQSVTRSDFMSVL
SNIEYILIKASYGQGLQQSRIANISIETAVKAEEMHFGRETAHLIEQCECPTGYAGFSCQ
SCASGYYRAKHVGLNVKEPRQLIAPCVPCQCNNHSEICDLETGKCLNCRDNTAGEHCSAC
APGYYGKVIGSVNDCSLCACPRTNPMSFSPTCVLKDGHDFLCNACLTGYEGQYCERCRVG
YYGNPEVPGGSCQQCQCNPSGSVHNNCDHVSGQCLCKQGVTGQLCDVCEPRHILVENDCI
SCDDDCTGVLLNDLDHIEKAIILVNFTGVTFVPYGMLADLDNATKYLKGSLLSREDPTYS
LEMAKGDLVNISRGTDQLHKELTRILKRGWQLNNATQRTMNETRRLTVFIDTVHATIKVL
AEVAASLNETLGPDFQLSNSTSQSLLEDTSAMLEAMRRRYLTHQVQNVTTALNAAERLLS
QVQEEYFKPQQDLAELQKRTRHLLANHNIQLQQAQELVNDAQTNTNETSRLLSLIYSNLA
ELNDKKLNIQENKELSIMLIKEGKELMDVAAALATDVKNSTSNLEIHRDGLVLWNAKLRY
HVDNLVMQMSTRGALELVYRAEDHAAEIQKLAEVLNSGLSNIRNVSLKENAVHTHSNITN
MIERTENLADDASRVIFNPLTSPEESLDSLGKEAFLLSSKCLNETKYLKRKNEGLVSRLN
GLKKKVEKIQESAHKITNQFNDSLLALRTLPNDTSVNIFKAKELAVSANTSAVAGLSHIM
DFSQKLLNTSSVLSKVNDTLRKTNELIIESSKAAASAERQVKEVEAQANLLFDRLKPLKM
LEENLSRNLSEIKELISQARKQAASIKVAISADRDCIRAYQPQVSSTNYNTLTLNVKTTE
PDNLLFYLGSSSNSDFLAVEMRRGKVAFLWDVGSGATRLEYPNLQINNNKWQRIHITRFG
KTGTLNVEEMNSNQKSLTKSATSPGTATILDVNKSTLIFVGGLGGQIKKSPAVKVTHFKG
CMGAASLNGKSIGLWNYIEREGTCNGCFGSPQDEDTSFHFDGSGYSVVERALRSTVTQII
MFFSTFSPNGLLLYLASNGTRDFLSLELVDGKVRLTVDLGSGPLTLTTESRYNNGTWYKI
SFSRNKKQGVLTVMDADNLNYKETKQGESPGVASDLNRSDKDPIYIGGLPRSRAVRKGLN
SRTYVGCIKNLEISRSTFDLLKNSYGVRKGCVLEPIRSVNILNDGYIELLPKSLSPESEL
MVTFATKNSSGIILAGLSKGMEKRRRRQAHLPFFSIMLIDGHLVVHINAGDRASTRKIIL
QPANGTYSDGQEHSVILIRNKRMITVQVDESNPAETRLGLSAEMSPMNISNFYAGGIPAG
EGISGFKMTGSFYGCISNLIFNMQLLDFTTAVRYKHVDMDSCLLSEKHKPVIQAEDIEIQ
PELQALPIPLQPLTDIKKVHTTNLMHAAPVSKAQCAQDSMPDHVPGAHQFGLAKGSHMVL
LFNQSTIRRKLSVQLKLRTYAISGLIYYLAHQNQIDYAALQLHGGQLYFSFDLGKGKAVA
FHPAAISDGKWHTVKTEYVKRKGIITVDGQESSEINALGDGNTLDVEGKLYLGGLPLDYT
ARNIGNVTHSTPACIGSVMINNKQVDKESPVSILSVTKCYAAAQEGTFFDGSGFAALVKE
GYKVRSDVNITLEFRTIAMNGVLLGISSAKVDAVGLEIVNGKVLFHVNNGAGRITAAYEP
RRENSLCDGKWHKLQANKSKHRIALMIDGNLVQADNPYIQSTSADTNNPIYVGGYPGDMK
QNCLTSKSSFHGCLRHLKLIKGQQVESYDFSQAFDLRGVFPHSCPGAGH
NT seq
9510 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctccctggctgctgtgcagagtgcaggagagataagaaagggtgaggggagg
ggtgggtttccctggagggggagggcaaagcgcactagaagaagttgctctccggaacaa
accacgtgcagcgtcctccccagccacctgagctaccgctgtcgctgcctgggccgggag
gagatgtccggctgctgcccctgccgatggctgctgctggcgtctgtgctctggggggcc
ggggaatgccagctgcgaggtttgtttcctgctattttaaatctggctagccatgctcat
atcaacaccaatgccacctgtggtgagaagggaccagagatgttctgcaaacttgtggaa
catgtgccgggccgacctctacggaatgcacaatgcagggtgtgtgaccacaacagtgct
aaccccaaagaacagcaccctatctccaatgctatagatggcaccaataactggtggcaa
agtcccagcattcagaatggaagggaataccattgggtcaccatcacactggatctaaga
caggtctttcaagttgcatatgtgatcatcaaagctgctaatgctcctcgacctggaaac
tggattttggaacgttcagtggatggcacagagttcaaaccctggcagtattatgcaatt
agtgacacagagtgtttaactcgttataatgtaacaccaagacttgggcctcctacttac
aagagagatgatgaagtgatctgcacctcttactattccaggctagttccattagaacat
ggagagattcacacctcattgatcaacggtagacctagtgccgatgacccttcgcaaaca
ctattggagttcacctctgcccgatacattcgtcttcgcctgcaacgtattagaactctt
aatgctgacctcatgactcttagccatcatgatcctaaagacctggatcccattgttacc
agaaggtattactattcaataaaggatatctctgttggtggcatgtgtatttgctatggc
catgctcgaagctgcccattggatgaaaccacaaagaaactgcaatgccagtgtgaacac
aatacctgtggagagagctgtaatgagtgttgtcctggttaccatcaaaatccatggaga
ccaggaaccatttctgctggcaacaaatgtgagaagtgcaactgtcataacaaagcagaa
gattgttattatagccagagcgtggcagatcagaataggagcataaatattcacggccag
ttcataggaggtggagtctgtataaactgtacacaacacacaactgggatcaactgcgag
atctgtgctgatggatactataggccatataaagtttctccctatgaagattacccatgt
catccttgtgactgtgatccatttggggctctgagttctgactgcattaaggattttgat
cattctgatcatcagcatgggactcagccaggtcattgtcaatgcaaagaaggttacaca
ggagaaaaatgtgaccgctgtgcatttggctacaagggctatccaacctgtgtgcactgt
aactgcagtctggttggaagcattaatgatgacccttgtacagaaccttgtctttgcaag
gaaaatgtagaaggtgaaaactgtgaccgctgcaaaccagggttttacaatttacaagaa
aggaatcctcatggctgtacagagtgcttctgctttggggtttctgatgtctgtgacagc
cttgcatggcccatcagtcaggtgtcagatatggctgggtggcttgtgactgatctggac
actaaaaagagtgtggaacctcaacaaggccagtttgatggacctcatcaaataagtgtc
aacaacacagctgctgtgaaaatactgaaatctacttattactggtcagcaccagagcca
tacctaggaaataaactcactgcctttggtggatacttgaagtacactgtgtcttatgat
attccaatggagagcgtggacagtgacatggtgtctaatgtggatgttatcattcagggc
aatggacagattttgagcaccagatctgaagggttgtcattgcagccctatgaggagtat
tctaatacagtgaagctcatgtctgagaatttaatagattttaatacaaaaaaggctata
gatcgggacaggctgatgactgttttagcaaatgtgactcatcttctgatcagggccagt
tacaacattgcaaagagagccatatacaggctggactctgtcaccctggatatggcaagt
gctaatgctatcgatctgtcatcggcaacagaagtggaacactgtgaatgtccccaaggg
tatactgggatttcctgtgagtcctgtctctctggatactaccgggtgggtggaatactc
tttggaggtatttgtcaaccctgcgaatgccatggccatgcaactgaatgtgacattcac
ggtgtctgctttgcatgtcaacataacactacaggactttcctgtgatcagtgcttgcca
gggttctatggaaatccatcccaaggaacaccagaggactgccagccatgtgcctgccca
ctaaaaactgatacaaacaattttagtcccacctgccacatggacaatagtggtgaagtt
atctgtgacaagtgtctgccaggctatgcaggatcacggtgtgaaagatgtgctaatagt
tactacggaaatccattggtgtctggcgagtcatgtgttccttgtgactgcaatggcaat
atagatccaacagaagatggaaactgcgatgcacttacaggagaatgtttgaaatgtgtg
gggaacactcagggccctcactgtgaaaagtgtgcagatgggtactacggggatgcagtg
attgctaaaagctgtcatgtctgtgagtgccatgtgaatagttccctttccaacatttgc
catcctgagactggcctatgtcactgcaaaccaaatgtgattggaccaagatgtgataca
tgcttgaatggcttttatggcctgaatactggacttggctgccttccctgcaattgtagt
caatatggctcagtgtcagaggactgtactgatgaaggacagtgccactgtgtaccagga
gtgactggggagaagtgtgatcgttgtgctcatggcttttatgcattccaggatggtggc
tgtacaccttgtgattgtgctcatactcagaacaactgtaatgaggattctggacagtgc
atctgtcctcctcacgcgcagggaccaaaatgtgaactctgtgaggacaatttttggggt
cttcatcttgagcttggctgcaaggcctgtaactgcagtgatgtaggttctaccagtcta
cagtgtgacttacagactggtcaatgtcaatgtaaagatgaatttggaggagaagactgt
tctaggtgtgccttaggctatagggactacccagattgtgtttcctgtgactgtgacttg
agtggcaccaaagcagacaggtgtgatgagaatcaaggaatctgtagttgtgaagaagaa
agtggcatttgtgcctgcaaggaaaatgtatttgggttgcactgcagtgaatgcaagact
ggaacctttgctctccatgctagcaaccctttaggatgcactccttgtttctgttttggg
ctgtctgagatttgttcagaattagaagagcatgtgagaattccggtaatcttgactcca
gaacagtccattctgcatgtggtttctcaaagtaatctcactgggacaactgagggggtg
ttttctcagttttctgatgttttgctggatgccgcaattgtcagacagcacttgaaaact
gagccattttattggaggttgccaggccagttccagggagaccagcttatggcctatgga
ggaaaactgaagtatactgttgcattttatgctttggatggctttggcacctcaaacttc
gaaccacagattctgataaaggggggtcacactagtaaattggtcatctatgtggatatc
tctgccccacaaaatggagtaagaagtgaggaggaagtagaaatgaaggagcatgtttgg
aaatactttaactccgtgtctgaccaatctgtcacacgttctgatttcatgtcagtgctt
agcaacattgaatatatccttattaaggcatcgtatggtcaaggattacagcaaagcaga
attgcaaatatctcaatagaaacagcagtgaaggctgaggagatgcattttggcagagaa
acagcacacctcatagagcaatgtgagtgtcctactggttatgctggattctcatgtcag
agctgtgcatcggggtattacagggcaaaacatgtaggcctgaatgtgaaagaacctcgc
caactgattgcaccttgtgtgccatgtcagtgtaacaaccacagtgagatctgtgatctg
gaaacaggaaagtgcctgaactgcagagataacacagctggcgagcactgtagtgcttgt
gccccaggctactatgggaaagtaattggatctgtcaatgactgctctctttgtgcctgt
ccccgaaccaaccccatgagctttagtcccacttgtgttctgaaggatggccatgatttc
ctctgcaatgcttgtctcactggatatgaagggcaatactgtgaaaggtgccgggtaggc
tattatggtaatcctgaagtgcctggtggcagctgtcaacagtgtcagtgcaatccaagt
gggtcagttcacaataattgtgatcacgtatctggacagtgcctctgtaagcaaggtgta
acaggacaactgtgtgatgtatgtgaaccaagacacatccttgtggaaaacgactgtatt
tcttgcgatgatgactgcactggtgttttgttaaatgacttggatcacattgagaaagcc
ataattttggtaaacttcactggtgttacctttgtaccgtatggcatgctggcagatttg
gacaatgcaacaaagtacctaaaggggtctctattgtctagagaggatcccacctattca
ctggagatggcaaaaggagatcttgtgaatatatcaagaggcacagatcaactgcacaaa
gagttgactagaatattgaagagaggttggcaactcaacaatgcaactcaaagaaccatg
aatgagactcgacgtttgactgtatttattgacacagttcatgcaaccatcaaagtactt
gctgaagtggctgcatctctaaatgagacactgggaccggatttccagttgtcaaacagt
acatctcagagtctcctggaagatacctccgccatgctggaagcaatgcgaagaagatat
ttaacgcatcaggtccaaaatgtcaccactgcactgaatgctgcagagaggttgttgtca
caggttcaggaagagtatttcaaaccccagcaggatcttgcagaactacaaaaaagaaca
agacatctcttagcaaaccacaacatccaactacagcaagctcaagaactagtgaatgat
gctcagactaacaccaatgagaccagccgtttgctttcccttatctacagcaacctggca
gagttaaatgataaaaagctaaacatacaagaaaacaaggagctttccatcatgctaatt
aaagaagggaaagaattgatggatgttgctgctgcccttgccacagatgtaaagaactct
acgtcaaatctagagatccatcgagatggactggtcctatggaatgccaaattgaggtat
cacgtagataatctggtcatgcagatgtccacgaggggagcacttgaactagtctacaga
gcagaagatcatgcagctgaaattcaaaaacttgcagaagtgctgaacagtggtctctca
aatataagaaatgtatctctgaaagaaaatgctgtccacacccactccaacattacaaat
atgattgaaagaactgaaaatctggcagatgatgcttctagggtaatatttaatcccttg
acttcaccagaggaatctcttgattctcttgggaaagaagcttttctgcttagttctaaa
tgtctaaatgaaacaaaatatctgaagaggaaaaatgaaggccttgtgtctagactgaat
ggactgaaaaaaaaggtggaaaagattcaagagagcgctcataaaattactaaccaattt
aatgattcactgttggcactgagaacattgcctaatgataccagtgtcaacatttttaaa
gcaaaagagttggctgtgtctgctaacacaagtgctgttgctggcctaagccacattatg
gacttcagtcagaagctgctaaacacttcttctgtactgtcaaaggttaatgacacattg
aggaaaaccaatgaacttataatagagtcttcaaaagctgcagcctcagctgaaagacaa
gttaaggaagtggaagcacaagccaaccttttatttgataggctgaaacctctgaaaatg
ctggaagagaacctgagcagaaatctgtctgaaattaaagagctcatcagtcaggcccgc
aaacaggcagcatccattaaagttgcaatctcagcagacagagactgtattcgtgcttac
caaccccaggtttcttccactaactacaacaccttaacattaaatgtgaaaacaaccgaa
cctgacaacctcctcttctatctgggcagcagcagcaatagtgacttcctggcagtggag
atgcgacgtggtaaggtggccttcctttgggatgtgggctcaggagcaacaagactggaa
tatcccaatcttcaaatcaacaataataaatggcaaagaatacatataaccaggtttggg
aaaaccggtaccttgaacgtagaggaaatgaactctaatcagaagtctttaactaaatct
gcaacttctcctggcacagctactatactggatgtaaacaaatcaacactgatatttgtt
ggaggacttggagggcaaatcaagaaatcacctgctgttaaggtgactcattttaaagga
tgcatgggagcagcatccttgaatggaaaatctattggtctttggaattacattgaaaga
gagggcacctgcaatggatgctttggaagcccacaggatgaagatacttctttccatttt
gatggcagcggatattcagtagtggagagggccctccgctccactgtgactcagataatc
atgtttttcagcaccttctcacctaatgggctcctgctgtatcttgcttctaatggcact
agagatttcttgtccctcgagcttgtagatggcaaagttagactaacagttgatcttggt
tcaggaccgcttacacttacaactgaaagtcgatacaataatggaacatggtacaaaatc
tcattcagtcggaacaagaagcaaggagttttgactgtcatggatgctgataatcttaat
tataaagaaactaagcaaggagagtcccctggggtagcctcagacctaaatcgctcagat
aaggaccctatttacattggtggactgccaagatctagggctgtgaggaaaggacttaac
agcagaacatatgttggatgcattaagaacctggaaatatcccgttccacctttgacttg
ctaaaaaactcatatggtgtcagaaaaggctgtgtcctggagccaatccgtagtgttaac
atcttgaatgatggctacattgagttgctacctaagtccctgtctccagaatcagaactg
atggtaacttttgctactaagaacagtagtggcattatcttggctggtctcagcaaagga
atggagaagcgaagacgcagacaagcacatttgcccttcttttccatcatgctgattgat
ggtcatcttgtagtgcatattaatgctggagacagagcaagtactagaaaaatcatcctc
caacccgctaatggaacatacagtgatgggcaggaacattctgtcatcctgatccggaat
aagaggatgataacagtgcaagtggatgaaagtaatcctgcagaaacgagacttggcttg
tcggcagaaatgagccccatgaatatttccaacttctatgctggtgggattccagcagga
gagggcatttctgggttcaagatgacaggatcgttttacggctgcattagcaatttgatc
tttaatatgcagcttttggatttcaccactgcggtgaggtacaagcatgtggatatggac
agctgcttgctttcagagaagcataaacctgtcatacaggcagaagatattgaaattcaa
cctgaactgcaggctttgccaattcctctgcaacctcttacagatattaagaaagtacat
actacaaacttaatgcatgctgcccctgtcagcaaagcacagtgtgcacaggattcaatg
ccagatcatgttcctggtgcccaccagtttggccttgctaaaggcagccacatggtactg
ctttttaatcagtctaccatcaggaggaaactttctgtccagctgaagctgagaacatat
gccattagtggcctgatttactacctggctcatcagaaccagattgattatgcagccctt
cagcttcatggaggacaactctatttctcatttgaccttggaaaaggaaaggcagtagcc
tttcaccctgctgctatcagtgatggcaaatggcacacggtaaagacggagtatgtgaaa
cgaaaaggcataatcactgtggatgggcaggaatcttcagaaattaatgctctgggcgac
ggtaacacgttggacgtggaggggaagctttatctgggagggcttcctttagattataca
gctagaaacattggaaatgtcactcacagcacccctgcatgcattggcagtgtgatgatt
aacaacaagcaagtcgataaagagagccccgtctccattctttctgtgactaaatgctat
gcagcagcacaggaaggcactttctttgatggaagtgggtttgctgcccttgtcaaagaa
ggttataaagtccgatcagatgtgaacattacgcttgagttccgcaccattgctatgaat
ggagtgcttcttggaatcagtagtgctaaagtagatgccgttggactggagattgtgaat
ggcaaggttttgttccatgtcaacaatggagctggcagaataacagccgcatatgaacca
agaagggaaaatagcttatgcgatggaaagtggcacaagcttcaagcaaacaaaagcaag
catcgcattgcactgatgattgatgggaatttggttcaggctgataatccctacatccag
tcaacatctgcagatacaaacaatcccatttatgttggaggctatcccggtgacatgaag
caaaactgcctgacaagcaagagctcttttcatgggtgtttgagacacctcaagctaatt
aagggccaacaggtagaatcctatgacttcagccaagcctttgacctgcgtggtgtgttt
cctcattcatgccccggggctggtcactaa
DBGET
integrated database retrieval system
