Pelodiscus sinensis (Chinese soft-shelled turtle): 102457455
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Entry
102457455 CDS
T02980
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102457455 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102457455 (MSH2)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102457455 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
102457455
NCBI-ProteinID:
XP_006125560
Ensembl:
ENSPSIG00000015939
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MLVVAIANSFHSFFIQIDSEKADTSHGKHSDKEQMLIDRDQKPGSYAAMFLWFIDTRPFT
GNQKLESVVLSKMNFESFLRDLLLIRQYRVEVYKNRAGSKSTKENDWYLAYKGSPGNLSQ
FEEILFGNNDMSTAIGVVGVKLHTADGQRLIGVGYVDTTLRKLGVCEFPDNDHFSNLEAL
LVQIGPKECVLAAGETVGDMGKLRHIIQRGGIMITDRKKAEFTTKDTVQDLNRLLKSKKE
EQVTSVTLPEMEKQVAISSLSAVIKYLELLSDESNFGQFELNSFDLSQYMILDNAAVRAL
NLFQRSVENANNTQSLVGLLNKCKTPQGQRLINQWIKQPLMDKNRIEERLNLVETFVVDT
ELRQCLQEELLRRFPDLNRLAKKFQRQVATLQDCYRMYQAVNQLPNVVQALEKHEGTHQM
LLLTVFVMPLNDLSSDFSKFQEMIETTLDMNKVENHEFLVKASFDPNLTELREKMNILEE
NMQSLLKTAARELGLEAGKNMKLDSNSQLGHYFRITCREEKVLRNNAKYKILDTQKNGVK
FTNSKLSSFNEDYIKNREEYEEAQEAIVKEIINIASGYVEPIQTMNDVIAHLDAVVSFAH
VSNGAPVPYVRPVILEKGQGKIVLKGCRHPCIEVQDDIAFIPNDVHFEKGKQMFHIITGP
NMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVTIVDCILARVGAGDSQLKGVSTFMAEML
ETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTAL
ANEVPTVNNLHVTALTTDGMLTMLYRVKKGVCDQSFGIHVAELAAFPKHVIESAKEKAVE
LEEFQNIGKPEESEGEPAAKRRYREKEEGEKIIQDFLCKVKALPLTDMSEEDIRTKLKEM
KAEVLAKNNSFVNEIVSRIKVTP
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgctagtagtagcaatagccaatagcttccactcctttttcatccagattgattcagag
aaggctgatacctcacatggcaaacatagtgataaggagcagatgctgattgaccgtgac
cagaaacctgggtcttatgctgctatgtttttgtggttcattgacaccagaccatttact
ggtaatcagaaacttgagagtgttgtgcttagtaaaatgaactttgaatcttttctgaga
gatctacttctgattcgtcagtacagagttgaagtttacaagaaccgagcaggaagtaaa
tctactaaagagaatgactggtatttggcatacaagggttctccgggtaacctttcccag
tttgaggaaattctttttggcaataatgacatgtcgactgccattggggttgtgggcgtt
aagctacatactgctgatggacagagattaattggagttggatatgttgacacgactctt
aggaagctgggtgtctgtgagtttccagataatgatcatttctcaaaccttgaagctttg
ctcgttcaaattggacctaaggaatgtgtgttagcagcgggagagactgttggcgatatg
ggaaaactgagacacattattcaaagaggaggaatcatgattacagaccgaaaaaaggct
gaattcacaacaaaagatactgttcaggatctcaaccgcttgctaaaatcaaaaaaggaa
gagcaagtgactagtgtaacattaccagagatggaaaaacaggttgctatttcatccttg
tcggccgttatcaagtatttagagctcttgtcggatgaatctaactttggacaatttgaa
ttgaatagctttgacctcagtcagtatatgatactggacaatgcagctgttcgagccctt
aatcttttccagagatctgttgaaaatgccaacaatacacaatcattggttgggttatta
aataagtgcaaaactcctcaaggacaaagattgattaatcagtggatcaaacaaccactt
atggacaagaacagaatagaagaaaggttaaatttagttgagacctttgtggtagacaca
gagctacggcagtgccttcaagaagagcttctacgtcgttttccagatctcaaccggcta
gccaagaaatttcaaagacaggtagcaacactacaagattgttaccgcatgtatcaagct
gttaaccaactgcctaatgtcgtacaggcactggaaaaacatgaaggaacacatcagatg
ttgttgctgacagtatttgtaatgcctcttaacgatctcagctccgacttctccaagttt
caggaaatgatagaaacaactttagacatgaacaaggtggaaaatcatgaattccttgtg
aaggcttcttttgatcctaatctgacagagttgagagagaagatgaacatattagaggag
aacatgcagtcacttctaaagactgcagccagagaactaggcttggaagctggcaagaac
atgaaactggactccaattcacagttaggacattacttccgaattacctgccgggaagag
aaagtcctccggaacaatgcaaaatataagatcttagatacccagaagaatggtgtgaaa
ttcacaaacagtaaattgagctccttcaatgaagactacataaaaaacagagaagagtat
gaagaggctcaggaagccattgttaaagaaatcattaatattgcttcaggatatgtagag
ccaatacagacaatgaatgatgtgatagctcacttagatgctgttgtcagttttgctcac
gtatcaaatggagctcctgtgccatacgtacgtccggttattctggaaaagggacaagga
aagattgtgctgaaaggttgcagacacccttgcattgaagttcaagatgatatagcgttc
atccccaatgatgttcactttgagaagggcaagcagatgttccatattattactggtcct
aacatgggagggaaatcaacatacattcgccagactggagtcatagttctgatggcccaa
attgggtgctttgtaccatgtgactcagcggaagtgactattgtggattgtattctggct
cgggtaggagcaggagacagccagttgaagggtgtctcgactttcatggcggaaatgtta
gaaactgcttcaattcttcggactgcatctgaaaactctttaataattattgacgagttg
ggaagaggaacttcaacctacgatggatttgggttggcatgggctatttcagaatatatc
gccagcaaaatttgtgctttctgtatgtttgccacgcattttcatgaactgacagcactt
gccaatgaagtgccaactgtgaataatttacatgttacagcactaaccactgatgggatg
ttgaccatgctttaccgtgtcaagaaaggtgtctgtgatcagagttttggaatacatgta
gcagaacttgctgcttttccaaagcatgtaatagagagtgcaaaagagaaggctgtggag
ctagaggagttccaaaatattggaaaacctgaggaatctgaaggagagccagcagctaaa
agacgctacagagaaaaagaggaaggtgaaaaaataattcaggatttcctttgcaaagtg
aaagcattgcccttgacagacatgtctgaagaagacatcagaaccaaactgaaagaaatg
aaagctgaagtgctggcaaagaacaacagttttgtgaatgaaattgtttcccgaataaaa
gttactccatga
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